KEGG   Methanosarcina sp. Kolksee: MSKOL_0959
Entry
MSKOL_0959        CDS       T03821                                 
Name
(GenBank) Archaeal transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mek  Methanosarcina sp. Kolksee
Pathway
mek03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mek00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSKOL_0959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mek03021]
    MSKOL_0959
Transcription machinery [BR:mek03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MSKOL_0959
 Prokaryotic type
  Archaeal type
    TFE
     MSKOL_0959
SSDB
Motif
Pfam: TFIIE_alpha Ribosomal_aS21 RepL Zn_Ribbon_TF CoiA_N
Other DBs
NCBI-ProteinID: AKB46736
LinkDB
Position
complement(1198695..1199189)
AA seq 164 aa
MVDINDKVIRGYLLSLVGEEGLQMIEKMPEGEVTDEEIAAKTEVLLNTVRRTLFILNENK
FAICRRERDSNSGWLTYLWRLDFSDIEHQLMKEKKKLLRNLKTRLDFEENNVFYMCPQGC
VRLLFDEATETEFLCPMCGEDLVFYDNSYFIDVLRKRVDALSSV
NT seq 495 nt   +upstreamnt  +downstreamnt
ttggttgatataaatgacaaggtaattagaggatacctcctgagccttgtaggggaagaa
gggctacaaatgattgaaaaaatgcctgaaggcgaggttacggatgaagaaattgcggca
aagaccgaggttctgttgaacaccgtgaggagaacgctcttcatattaaacgaaaacaaa
tttgcaatatgtcgtagggagagagattcaaacagtggatggttaacatatctctggcgc
ctggatttttcggatatagagcaccagctcatgaaagaaaagaaaaaattgctccgcaac
ctgaagactcgccttgatttcgaagaaaacaatgttttctatatgtgccctcagggttgt
gttcgccttctttttgacgaagctacagaaacagagtttctctgccccatgtgtggagaa
gacctggtcttctacgataactcatattttattgatgtcctgagaaagcgtgtagatgct
ctcagttcagtgtaa

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