Methanosarcina sp. Kolksee: MSKOL_0959
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Entry
MSKOL_0959 CDS
T03821
Name
(GenBank) Archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSKOL_0959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mek03021
]
MSKOL_0959
Transcription machinery [BR:
mek03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MSKOL_0959
Prokaryotic type
Archaeal type
TFE
MSKOL_0959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Ribosomal_aS21
RepL
Zn_Ribbon_TF
CoiA_N
Motif
Other DBs
NCBI-ProteinID:
AKB46736
LinkDB
All DBs
Position
complement(1198695..1199189)
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AA seq
164 aa
AA seq
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MVDINDKVIRGYLLSLVGEEGLQMIEKMPEGEVTDEEIAAKTEVLLNTVRRTLFILNENK
FAICRRERDSNSGWLTYLWRLDFSDIEHQLMKEKKKLLRNLKTRLDFEENNVFYMCPQGC
VRLLFDEATETEFLCPMCGEDLVFYDNSYFIDVLRKRVDALSSV
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
ttggttgatataaatgacaaggtaattagaggatacctcctgagccttgtaggggaagaa
gggctacaaatgattgaaaaaatgcctgaaggcgaggttacggatgaagaaattgcggca
aagaccgaggttctgttgaacaccgtgaggagaacgctcttcatattaaacgaaaacaaa
tttgcaatatgtcgtagggagagagattcaaacagtggatggttaacatatctctggcgc
ctggatttttcggatatagagcaccagctcatgaaagaaaagaaaaaattgctccgcaac
ctgaagactcgccttgatttcgaagaaaacaatgttttctatatgtgccctcagggttgt
gttcgccttctttttgacgaagctacagaaacagagtttctctgccccatgtgtggagaa
gacctggtcttctacgataactcatattttattgatgtcctgagaaagcgtgtagatgct
ctcagttcagtgtaa
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