Methanosarcina sp. Kolksee: MSKOL_1006
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Entry
MSKOL_1006 CDS
T03821
Name
(GenBank) HTH DNA-binding protein
KO
K07728
putative transcriptional regulator
Organism
mek
Methanosarcina sp. Kolksee
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mek03000
]
MSKOL_1006
Transcription factors [BR:
mek03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSKOL_1006
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
HTH_11
MerR
MerR_1
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AKB46783
UniProt:
A0A0E3QA70
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All DBs
Position
1268275..1269258
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AA seq
327 aa
AA seq
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MTKEVLIHQIIDVFSHAGFALSDRCNIRPRSFDVAARKDETLLLCKVLFNIDGLNEETAR
EMKYLAEYLGGSAIVVGAKTRDQMLEDSVVYMRYDILALNVQTLYDYFIENVPPLVSAAP
GGLYVSIEGDILKKARMGQSMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLQLEDIFG
VELARPINILKSCGSRKPRKKAESRTETQEKPYTLLPEDLILNTISMLGYDVLHTAQAPF
KAISRDESSVILTGVSEFNTTVVKRAHLMSSISCVTETQSVFIINGHSKIKSVENTVMIE
KKELDKISDSQELLTFIEERRETHEEK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaggttctcatacatcaaattatcgatgtattttcacatgcaggttttgca
ctttccgatcgctgcaatattcgtccgaggagctttgacgttgccgcacggaaagatgaa
acactattactttgcaaggttttatttaacattgacggcctgaatgaagaaactgccagg
gagatgaagtaccttgccgaataccttggaggctctgctattgtcgtgggcgcaaagacc
agagaccagatgcttgaagatagcgttgtgtacatgcgttatgatattcttgccctgaac
gtacagactctttatgactactttattgaaaatgttcctcctctcgtttcagcagctccg
ggtgggctgtatgtctccatagaaggagatatcctaaaaaaagccaggatgggtcagtca
atgtctcttgggacacttgcttccatggtaggggtttcgaggagaactatcagcaaatat
gaagaagaaggcatggatgcgtcaatagatgtcgtactccagctagaggatatctttggg
gttgagcttgcaaggcccataaatattctgaaatcctgcgggagcaggaagccccggaag
aaagcagaatccaggaccgaaacccaggaaaaaccctatacgcttttaccggaagatttg
atccttaacacaatttccatgcttggctatgacgtccttcatactgcccaggctcctttc
aaggccatttcacgggacgaatcctcagttatccttacaggagtcagtgaattcaatacg
accgtggtcaaaagggctcatttaatgagcagtatttcctgcgtcactgagacccaatcc
gtattcatcatcaacgggcactcaaaaataaaatccgtagaaaacacggttatgatcgag
aaaaaagaacttgacaaaataagtgattctcaggaactccttacctttatagaggaacgt
agagaaactcacgaagaaaagtaa
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