Methanosarcina sp. Kolksee: MSKOL_1165
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Entry
MSKOL_1165 CDS
T03821
Name
(GenBank) MarR family protein
KO
K07730
putative transcriptional regulator
Organism
mek
Methanosarcina sp. Kolksee
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mek03000
]
MSKOL_1165
Transcription factors [BR:
mek03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSKOL_1165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
HTH_24
MarR_2
HTH_Crp_2
MarR
HTH_3
HTH_45
HTH_11
Mnd1
Rrf2
Fe_dep_repress
HTH_IclR
DUF7343
HTH_27
wHTH-PRTase_assc
HVO_A0261_N
HTH_28
HTH_36
HxlR
HTH_13
HTH_PafC
HTH_5
GntR
HTH_10
NirdL-like_HTH
Phage_rep_O
TrmB
B-block_TFIIIC
YdaS_toxin
HTH_23
TetR_C_7
WHD_MCM8
Motif
Other DBs
NCBI-ProteinID:
AKB46942
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Position
1469464..1470252
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AA seq
262 aa
AA seq
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MIKILQTKSGVTKFQVLIEIAAHQPNVRQKEIAAKIGITPQAVSEYIKELVNDGLIVTEG
RVRYRITKEGVEWVLDNATEMKQYARFVMEDIINHISTWTAIAKEDVKEDQQVYLKMEGG
LLYVSSMEKTGASGNVISDASAGEDVGVTSLRGLIDLENATITICKVPRIERGGSRKVDI
ERLRALTSSKSYIAAIGVEALIALRKLNIAPNVMFGSNESVIEAAYHGLSSLVVSVDEQV
PSLLNRLETENLEYELVDLTLE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatcctccagactaaaagcggagtaaccaagtttcaggtccttatcgaaatt
gcagcccatcagccgaatgtaagacaaaaagaaattgccgcaaagataggaataactcct
caggccgtttccgaatatatcaaagaacttgtaaatgacgggctgatagttactgagggc
cgggttcgctataggattacaaaagaaggtgtagaatgggtccttgataatgccacggaa
atgaagcagtacgcccgctttgtcatggaggacataatcaaccatatctcaacctggaca
gcgattgcaaaagaggatgtaaaggaagaccagcaggtatacctgaaaatggaaggtgga
ctcctttacgtcagcagcatggaaaaaacaggagcatcaggcaatgtaatttccgacgca
tctgccggggaagatgtaggagtaacgagcctgcgaggcctgatcgacctggaaaatgct
acaattacaatctgcaaggtcccgaggatcgagcgtggaggctcaagaaaggtagatatt
gaacgcctgagggccctgacaagttcaaaatcctatatagcagctataggcgtggaagca
cttatcgctctgcgcaagctcaacatagcccctaatgttatgttcggaagtaacgaatca
gttattgaggctgcatatcacggcttatcatcccttgtagtctcagtagatgagcaggtt
ccttcccttcttaacaggctggaaactgaaaatcttgagtacgaactcgtagacctgact
ctcgagtaa
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