Methanosarcina sp. Kolksee: MSKOL_1200
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Entry
MSKOL_1200 CDS
T03821
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSKOL_1200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mek03019
]
MSKOL_1200
03009 Ribosome biogenesis [BR:
mek03009
]
MSKOL_1200
04131 Membrane trafficking [BR:
mek04131
]
MSKOL_1200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mek04147
]
MSKOL_1200
Messenger RNA biogenesis [BR:
mek03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSKOL_1200
Ribosome biogenesis [BR:
mek03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSKOL_1200
Membrane trafficking [BR:
mek04131
]
SNARE
SNARE associated proteins
Others
MSKOL_1200
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSKOL_1200
Exosome [BR:
mek04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSKOL_1200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_14
AAA_22
TIP49
CDC48_2
AAA_33
NACHT
IstB_IS21
ABC_tran
AAA_28
AAA_24
Parvo_NS1
nSTAND3
Mg_chelatase
RNA_helicase
NPHP3_N
Sigma54_activat
AAA_7
AAA_18
ATPase_2
Vps4_C
AAA_lid_PRS2_C
AAA_17
AAA_25
NB-ARC
TsaE
ATPase
Zeta_toxin
DUF815
SLFN-g3_helicase
ResIII
PhoH
AAA_3
ORC-CDC6-like
Sigma54_activ_2
bpMoxR
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AKB46977
UniProt:
A0A0E3QAK6
LinkDB
All DBs
Position
complement(1521923..1524217)
Genome browser
AA seq
764 aa
AA seq
DB search
MADREKITAKLKVAEADQRDVGKGIVRIDDSFREKLDLKPFDVVEIRGGKSTSALVGRPY
PSDSGLDIIRMDGLIRTNAKTSIGEYVDIRKADWKEARSVTLAPVAKGMQIYAPSETLKA
VFMNRTVSRGDFISTTSLRRSRERETFGKGIMFEDFFQDFFGPGMEQSFGLGEIKLQVVS
TSPSGIVKITDMTEVELLHEAAEITPEQNVPTVMYEDLGGVKEAITKIREMIELPLKHPE
LFDRLGIDAPKGVLLYGPPGTGKTMLAKAVANETDAYFISVNGPEIMSKYYGESEKGIRD
VFEEAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKERKNVIVIGSTN
RPEAIDMALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVG
ADIAALCREAAMSSLRRILPKINLNEPEIPSEILDTLRVTREDFENALKDVQPSAIREIL
IEIPNVSWEDVGGLEGVKQLLKEAVEWPLKSPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESEANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGA
SVSEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILVPVPD
AGARKEIFKVHTAKMSLSEDVDIDKLVSMTDQYTGADIAAVCKKAGRDALREDLHAKEVK
QKHFLQAIAETGPSVTPDTMKYYQAVQSGLRKRQSKEIETPFYI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacagagaaaagataactgcaaaactaaaagtcgcagaagctgatcaaagagat
gtcggaaaaggaattgtccggatagatgatagtttcagggaaaagctggacctcaagccc
tttgacgtcgtggaaataagaggaggaaaatcgacttcagccctggtgggacgtccatat
cccagcgattcgggcctggatattatccgcatggacggacttatccgcacaaatgcaaaa
accagcataggggagtatgtggatattcgcaaagccgactggaaagaagcaaggagtgta
accctcgcgcctgtggctaagggcatgcagatctatgccccaagtgaaactcttaaagcc
gtattcatgaaccgtacggtttccaggggagattttatttccaccacaagcttgaggcgg
tcccgggaaagagagactttcggtaaaggaatcatgttcgaggatttctttcaggacttt
tttggtccaggtatggagcagtcatttgggctgggagaaataaagttacaggtggtctcc
acttccccgtccgggatagtaaagattacagatatgacagaagttgagcttttacacgaa
gctgcagagataactccggaacagaatgttcctactgttatgtatgaggacctgggtggg
gttaaagaggctatcactaaaataagggaaatgatagagctgcctttgaagcatcctgaa
ctttttgataggctaggaattgacgctccaaaaggagtactgctttacgggccgcctgga
acaggcaagacaatgctcgcaaaagcagttgcaaacgaaactgatgcttactttatctca
gtcaatggtccggaaattatgtccaagtattatggggaatcagaaaaagggatcagagac
gtctttgaagaagcagagaaaaacgctcctgcaatcattttccttgatgaaatagactcc
atcgcacctaagagggctgaggtgactggagaagtcgaaaggagagttgtagctcaactc
ctctccctgatggacgggcttaaagagcgaaagaacgtgattgtgatagggtcaaccaac
cgccctgaagcaattgatatggcactccgccgtcctggtcgatttgacagagagattgaa
ttaagggttccggacaccgaaggaaggcttgagattttccagattcatacgagaggtatg
cctcttgccgaaaacgtaaatctcatggacttcgctcagataacatatgggtttgtggga
gctgacattgctgcgctttgccgggaagctgcaatgagttccttgaggcggattctcccg
aagattaacctcaatgaacctgaaattccaagcgaaatccttgacacacttcgggtcaca
agggaagattttgaaaatgcccttaaagatgtccagccgtctgctataagagaaatcctt
atcgaaattcctaacgtgagctgggaagatgttggcggcctggaaggagtaaaacaactt
ctgaaggaggccgtagagtggcccctcaaaagtccggaatcgtacagggatataggagtt
gaagctcccaaaggagtgcttttatatggtcctccgggtactggaaagactctccttgca
aaagccattgcccatgagtccgaagctaacttcattaccgcaaaaggaagcgatctgctt
tccaagtggtacggagagtccgaaaaaaggattgctgaggtttttacacgggcaaggcag
gtcgctccatctattatcttcctggacgaacttgactctcttgcacctgttcgcggggct
tccgtaagtgagccacaggttacagctagaatccttaatcagctcctttccgagatggat
gggcttgaagaactcagagctgtagtggtaataggtgcaactaaccgtcctgatattata
gatccggctcttctaaggcctggacgttttgatgagttaattttagttcccgttccggac
gcgggagctcgtaaggaaatatttaaggttcataccgcgaaaatgtcgctttcagaggat
gttgatattgacaaactcgtatccatgaccgaccagtatacaggtgctgatattgcagcc
gtatgtaaaaaggcaggaagagacgcacttcgcgaagaccttcacgctaaagaagtaaag
cagaaacatttccttcaagcgattgctgaaaccgggccttcggtcactcctgataccatg
aaatattaccaggctgtacagagtggtctgagaaaacggcagtcaaaagaaatagagact
ccattttatatctga
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