Methanosarcina sp. Kolksee: MSKOL_1482
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Entry
MSKOL_1482 CDS
T03821
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSKOL_1482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mek02000
]
MSKOL_1482
Transporters [BR:
mek02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MSKOL_1482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_23
AAA_21
DEAD
AAA
MMR_HSR1
YtrI_N
AAA_30
nSTAND3
AAA_15
AAA_14
AAA_16
EI24
AAA_24
AAA_29
Zeta_toxin
RsgA_GTPase
ABC_ATPase
Rad17
AAA_28
TsaE
AAA_19
AAA_18
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AKB47259
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Position
1916648..1918477
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AA seq
609 aa
AA seq
DB search
MPHDIPHNITGRPAGGPGAFLHREKTEIKDVKGTLIRIIMYLGKWRRTLLLVFFCALVTT
VITIIGIQLNGYTVDEFISKKDIAGLARICIVMILIYLVAVFSTYMQNSLMIRVAQKTSA
NIRSDLFSSLQKLPLKYFDTHSSGDLMSRLTNDVDNINLTLSQSVVQLFSGVVSVVGMLV
AMLLLSPLLTLIGLLTMPLMFFTSKALAVKSQKFFKEQQSELGRLNGYIEEMVSGQKVIK
VFSREKEVEGHFKEINEKLVSSSMKAQTISSVMGPVNNTINNLTYLVITVCGGILIIKGF
AGITVGVIFSFLLYMRNFTQPINNILNLFSTIQSALAGAERVFEVMDEEKEKDADNARDI
QNIEGNVEIESVNFSYIPGKPVLKEATISAEKGQAIAIVGPTGAGKTTIINLLTRFYGID
DGAIYIDGQNINAITRKSLRQSISMVLQDTFLFSDTIRENIRYGKLTATDEEVEQAAKLA
HAHDFIMQLPQGYDTILTDNGGNLSQGQRQLLSIARAMIAQSSVLILDEATSSIDTRTEL
IIQSALLKLMHGKTSFVIAHRLSTIKNADKIIVLDGGRVVETGTHNELLLSGGFYANLYN
SQFKKGMAI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgatatacctcataatattacaggccgcccggcaggaggaccaggcgctttt
cttcacagggaaaaaacagaaatcaaggacgttaagggaacactcatacgcattattatg
taccttggaaaatggcggcgcacattgctcctcgtttttttctgtgctcttgttacaaca
gtgatcaccattatcggcattcaactaaatgggtacacggttgacgagtttatatctaaa
aaagatattgcaggacttgctcgcatctgtattgtcatgattctcatttaccttgttgcg
gttttttctacttacatgcagaattctctgatgatccgtgttgctcagaaaacttcggcc
aatatccggagcgatcttttcagcagcctgcaaaaactgcccctcaagtattttgatacc
cattcaagcggtgacctcatgagccgcctgacaaacgatgttgacaatatcaaccttaca
ctttcacagagtgtcgtgcagcttttttcaggtgtcgtcagtgttgtcggtatgctggta
gcaatgctgctgctcagcccgttgcttacactgatcgggctgctgacaatgccactgatg
ttctttacatcaaaagccctcgccgtaaaatcccaaaagttttttaaagagcagcaatct
gagcttggacggcttaacggatacatcgaggaaatggtttccggccaaaaagttattaag
gtcttttcccgagaaaaggaagtggagggtcacttcaaagaaatcaacgaaaagcttgtc
tccagttctatgaaagcacagacgataagcagtgttatgggaccggtgaataacactatt
aataatctgacctatttggttatcacggtctgcggcggtattttaataataaaggggttt
gcgggaatcactgtcggcgtaatattttctttcctgctctatatgcgcaattttacccag
ccgatcaacaatatcctcaaccttttcagcactatccagtcagcccttgcaggtgcagag
cgagtgtttgaggtaatggacgaagaaaaagaaaaggacgcggataatgccagagacatt
caaaacattgaaggcaacgtggaaatagaatccgttaatttttcatacataccgggtaag
cctgtacttaaagaagcaacaatttctgcggaaaaaggtcaggcgattgccattgtggga
ccgacgggtgcaggcaaaacaaccattatcaatcttctcaccaggttttatggcattgat
gacggagcaatctatattgatggacagaatataaatgccattactcgaaagagtctgcgg
cagtctatttcaatggtactccaggatacttttctcttctcagacaccatacgcgagaat
atccgctatggcaagctgacagcaacggacgaagaagttgaacaggcagcaaagctggca
catgcccatgactttattatgcaactgccacagggttatgatacgatccttaccgacaat
ggcggtaacctttcacagggacagcggcaattgctcagtattgcgagagcgatgatcgca
caatcttctgtgttgatacttgatgaagcgacttcttcaattgatacacggacagagctg
attattcagagtgcgctgctcaaactgatgcacggaaaaacaagttttgtcatcgcacac
cgcctttctaccatcaaaaacgcagataaaattatagtcttagacggtggacgagtagta
gaaacaggcacgcataacgaactacttctttcgggtggtttttatgccaacctttacaac
agccagttcaaaaaaggcatggcaatataa
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