Methanosarcina sp. Kolksee: MSKOL_1493
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Entry
MSKOL_1493 CDS
T03821
Name
(GenBank) Dipeptide transport ATP-binding protein DppD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSKOL_1493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mek02000
]
MSKOL_1493
Transporters [BR:
mek02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSKOL_1493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
nSTAND3
AAA_23
AAA_16
NACHT
NB-ARC
AAA_25
DUF87
RsgA_GTPase
APS_kinase
PRK
Zeta_toxin
TrwB_AAD_bind
Rad17
CbiA
DO-GTPase2
NPHP3_N
TIP49
CLP1_P
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AKB47270
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Position
complement(1936548..1938269)
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AA seq
573 aa
AA seq
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MSLLEINDFKCHYLTDIDTVKAVDGISFEIEKGEILGIVGESGSGKTTVALGIMGLLPEN
TAISGEILYRDELISSLPEPEMDKFRWKDIAIVFQNSLEVLNPVMKVGVQVREPMIKHLD
ISPEKAQSKCADLFRKVGLDPEWMDSYPHQLSGGMRQRVLLAMALSCDPKLLILDEVTSA
LDAFTRKEIRDLLVDLQKKNRYTMLMISHDITFVSSVASRIAVMYSGRVVETGPVRDILV
SPRHPYTRGLVHSTPDIFVYKDLWGIPGDVPTGDEFKGCPFSPRCTQKIDICSKVSPVLK
PIGDGREIACHRGGIADLLVAKNLSFSYRLPDGKDLQAVDNVNLEVREGEVLAIVGQTGS
GKSTLAHILANVIRPECGEVLFMDGNVVGGNYGSRFNGIQIVFQDPFSSTSNRFTVLDAI
KEPLYINKIGSNGDRLKMVKSTLELVRLPSTDNFLSKYCGELSGGQRQRVALARAMVMEP
KLLIADEITSALDVSTSANILRLLKGLQNRRGFAMIYISHDLSLTLKIADRIAVMNSGKI
VEMGNSHDVMLSPSDEYTKRLVGSRIGLCCHTH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctcgaaatcaatgattttaaatgccactatctgactgacattgataccgtt
aaggctgttgacggcatttcttttgagattgaaaaaggagaaattctgggcattgtagga
gaatccggaagtggcaagaccactgttgctcttgggattatggggctattaccggaaaat
acagctatttcaggggaaattctttacagggatgagctaatctcctctttgcctgaacct
gaaatggacaaattcagatggaaggacattgcaatagtttttcagaacagtcttgaggtg
ctgaaccctgttatgaaagtgggcgttcaggtaagagaaccgatgataaagcaccttgat
ataagccctgagaaagcacagagtaaatgtgctgatctgttcaggaaagttggccttgat
cctgaatggatggattcatatccgcatcaattatccggtggcatgaggcagagggttctt
ctggcaatggctctttcatgcgacccgaaattactgattctcgatgaagttacttctgcc
cttgacgcatttacccgaaaggaaatcagggaccttctggtcgaccttcaaaagaagaac
aggtatacgatgttaatgatctctcatgatatcacttttgtatcttctgttgcgtccagg
attgctgttatgtattcaggaagagttgttgaaacaggacctgtaagggatattctcgta
tctccccgtcatccttatacaaggggccttgtccactctaccccggatattttcgtttat
aaagatttatggggaattcccggggatgttccgacaggagatgagtttaaaggctgtcct
ttcagcccgagatgtacacaaaaaatcgatatctgcagtaaagtttctccggttctgaag
ccgataggagatgggagggaaattgcatgccatagagggggcatagcagaccttctggtg
gctaaaaacctgagtttcagctaccgtctgccagatggaaaagatcttcaggcagttgac
aacgttaatctggaagtgagggaaggagaggttcttgcaattgtcggccagaccggttcg
gggaagtcgaccctcgcacatattcttgcaaatgtgataaggcccgagtgcggagaggta
ttgtttatggatgggaatgttgtcgggggaaactatggaagcaggttcaacggtattcag
atagtattccaggacccattcagttcaaccagcaacaggtttactgtgcttgatgcaatc
aaagagcctctttatatcaataagatcggatccaatggagatagactgaaaatggttaaa
agtacccttgaacttgttcgtcttcccagtactgacaatttcctcagtaaatattgcggg
gaactcagcggcgggcagaggcagagggttgcacttgcaagagcaatggttatggagcca
aaacttcttattgccgatgaaataacttcggctctggatgtttcaacctctgcaaatata
ttgcgtcttttaaagggccttcagaacaggagagggtttgcaatgatatatatttcacac
gatctctccctgacactaaagattgctgacagaatagccgttatgaattccggaaagatt
gtagagatggggaattcccatgatgtaatgctctcaccttctgatgagtatacaaaaagg
cttgtggggtcaagaataggactgtgttgtcatactcattaa
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