Methanosarcina sp. Kolksee: MSKOL_2013
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Entry
MSKOL_2013 CDS
T03821
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mek
Methanosarcina sp. Kolksee
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mek03032
]
MSKOL_2013
03400 DNA repair and recombination proteins [BR:
mek03400
]
MSKOL_2013
Enzymes [BR:
mek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MSKOL_2013
DNA replication proteins [BR:
mek03032
]
Prokaryotic type
DNA Topoisomerases
MSKOL_2013
DNA repair and recombination proteins [BR:
mek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSKOL_2013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HIN
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AKB47790
UniProt:
A0A0E3QEC1
LinkDB
All DBs
Position
complement(2599420..2602305)
Genome browser
AA seq
961 aa
AA seq
DB search
MAKYEDENKSEDELKKSYQSTIIPEDKDGEPENEDGSAALTQEDPGKKLELNVFDPASDD
PEDEGLEPERSGVTTILIENEMKRSYINYAMSVIVGRALPDARDGLKPVHRRVLFAMKEA
GITHDKPYKKSARVVGDVLGKYHPHGDTAVYDTIVRMVQDFSLRYPLIDGQGNFGSIDGD
AAAAMRYTEVRMDKIAEEMLVDIDKETVPFMPNYDGSIEEPEVLPAKLPNLLVNGSTGIA
VGMATNMAPHNIGEVIDGIFMLIENPDVTIPELMTVIKGPDFPTSAHILGTAGIKSAYMT
GRGSLKIRAVAEIQELKKDRQQIIVTELPYQVNKARMIENIAQLVREKVIMGISDLRDES
DREGIRVVIELSRGTNPKVVLNQLYKHTQMETTFGVINLALVGGKPKELNLKELLEIYLE
YRVEIIQKRTLYDLKKSEERAHILDGLKIALDNIDEVVSLIKGSANADEAKQGLMENFSL
DEVQSKAILDMRLQRLTGLETQKVLEELEGLVKLIGELRKILENDELKYEIIRNELLELK
DKYGDARRTKIVQAASEVRDEDLIHEEEVVVTITNGGYIKRIPLKTYTMQRRGGRGIIGM
EMKEEDFVENLFISSTHNYILFFTNLGRLYWEKVYEIPEGSRQSRGKAIVNLLELKEGET
INAMIPVKEFDKNHYLLMATRAGTIKKTPLSEFKNPRKAGIIAVTLDEDDELVRVLLTNG
KKEVLMVSKKGKAIRFYEEDVRPMGRTARGVRGMTLEGPDDEVVSLDLVDETTTLLTVTE
NGFGKRTEYSQYPAHRRGGKGVITIITNERNGPVSRVRSVADDDELIFTSADGIIIRIPA
KEISIQGRNTQGVRIMNLKPGDTVAGIARIQNGKAEKNLKLTAFNDKEAAEATGAEEEAE
APEGESEGLDEFDELEDLEAADEAEETGETEEDEVEEDEVEEDEVEEDEAEEDEAEEIEK
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatgaagacgagaataaatctgaagatgaattgaaaaaatcttatcagtct
accattatccccgaagataaagatggagagccggaaaatgaggacggttcggccgccctt
acacaagaagatccaggcaaaaaactggaattaaacgtattcgaccctgcttcagatgat
ccagaagacgaaggtctggagccagaaaggagtggggttactaccatccttatcgaaaat
gagatgaaacgctcttacattaactatgcaatgagtgtaatcgtcggaagggcacttccc
gatgcccgagacggcctaaagccagttcaccgcagggtcctttttgccatgaaagaggca
gggattacgcacgacaaaccttacaagaagtcagcccgtgtggtaggagacgtgctcggt
aaatatcaccctcacggagatactgcggtctacgacactattgtgcgtatggtccaggat
ttctctcttcgttaccctttaattgatgggcagggaaatttcgggtcaatagatggggac
gcggctgctgccatgcgttacactgaagtccgtatggacaaaatcgcagaagagatgctg
gtagacatcgacaaggaaacagtccccttcatgccaaattacgacgggtcaatagaagag
cccgaagtcctccctgcaaaacttccgaaccttcttgtcaatgggtccacaggtattgca
gtaggaatggcaacaaacatggctcctcataacatcggagaggtcatcgacggcattttc
atgcttattgaaaatcctgacgtcacaattcctgagctcatgactgtaatcaaagggccg
gattttcctacaagtgctcatattcttgggacagcaggcataaaatcggcttatatgacc
ggaaggggttctttaaagattagggccgttgccgagattcaggagttaaaaaaagacaga
cagcaaattatcgtaaccgaacttccttaccaggtaaacaaagccaggatgattgaaaat
attgcccagctagttcgggaaaaggtaatcatgggaatttccgaccttcgtgacgagtct
gacagggaaggaatcagggtagttatcgagctttctcgaggcacgaatccaaaggttgtt
ttaaaccagctttataagcatactcaaatggagactactttcggggtaatcaatctggct
cttgttggcggaaaaccaaaagagctgaacctgaaggaacttcttgagatctatcttgaa
tacagggtggaaattatccagaagcggaccctttatgacctcaagaagagcgaggagaga
gctcatatccttgacgggctcaagatcgccctggataatatcgatgaggttgtctctcta
attaagggctcggcaaacgctgatgaagcaaagcagggtttaatggagaatttttccctt
gacgaggtccagtccaaagctatccttgatatgcgcctgcagcgcctgacaggacttgaa
acccagaaggtgcttgaggagcttgaagggcttgtaaagctgataggtgaactcagaaaa
atccttgagaacgatgagctcaagtacgaaataatcaggaatgaacttctggagctcaag
gataagtatggggatgctcgcaggacaaagatcgtgcaggctgcttctgaagttagagat
gaggatctgattcatgaagaggaagttgttgtcacgattaccaatggaggctacataaag
cgcatcccactcaagacttacactatgcagcgccgcggaggcaggggtataatcggcatg
gaaatgaaagaagaagacttcgtggaaaatctcttcatttcctcaacccataactatatc
cttttcttcacaaaccttggcaggctctactgggaaaaagtatatgagatccctgaaggc
tcccgtcagtccagaggcaaagccatagtaaaccttctggagcttaaggaaggcgaaaca
atcaatgcaatgatcccggtcaaggaatttgacaaaaatcactatctgctgatggcaaca
agggcaggtaccattaaaaagactcctctctcggaattcaagaacccgaggaaagcaggc
ataattgcagtcacccttgacgaagatgacgagcttgtaagagtcctccttaccaatggc
aaaaaagaagtcctgatggtttcaaagaaaggcaaagctatccgcttctatgaagaagat
gtccgccctatgggccgaactgcaagaggtgtccggggtatgactcttgaaggcccggac
gacgaggttgtcagcctggaccttgttgacgaaacaacaaccctcctgacggtgacagaa
aacggctttggcaagagaaccgagtactcccagtaccctgcgcaccgccgcggtggaaaa
ggcgtgataacaatcattaccaacgagaggaatggccctgtctcaagagtccgatccgta
gccgatgacgatgaacttatcttcaccagtgccgacggcatcattatccgcattcctgct
aaagagatctcgatccagggcagaaacacccagggtgtaagaattatgaatctaaaaccc
ggcgacacagtcgcaggtatagccaggatccagaacggaaaagccgaaaagaaccttaaa
ctcacagcctttaatgataaagaagccgcagaagcaactggagcagaagaggaagccgaa
gctccggaaggcgaatctgaaggtctagatgagtttgacgaattggaagaccttgaagct
gccgacgaagctgaagaaaccggggaaaccgaagaggatgaagtagaagaggatgaagta
gaagaggatgaagtagaagaggatgaagcagaagaggatgaagcagaagaaattgaaaaa
gagtga
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