Methanosarcina sp. Kolksee: MSKOL_2150
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Entry
MSKOL_2150 CDS
T03821
Name
(GenBank) Putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mek
Methanosarcina sp. Kolksee
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mek03400
]
MSKOL_2150
Enzymes [BR:
mek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSKOL_2150
DNA repair and recombination proteins [BR:
mek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSKOL_2150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
ResIII
Helicase_C
DEXQc_Suv3
HTH_61
DNA_pol_lambd_f
HHH_RS2-RL21-YNQ2
DUF7898
Cdd1
IMS_HHH_1
DUF4189
Motif
Other DBs
NCBI-ProteinID:
AKB47927
LinkDB
All DBs
Position
complement(2779468..2781675)
Genome browser
AA seq
735 aa
AA seq
DB search
MKIESLDLPDEVKRFYLDSGILELYPPQAEAVEKGLLEGRNLLAAIPTASGKTLLAELAM
LKSILAGGKALYIVPLRALASEKFRRFREFSELGIRVGISTGDYDMRDEGLGVNDIIVAT
SEKTDSLLRNETAWMQEISVVVADEVHLIDSPDRGPTLEVTLAKLRKMNSSCQILALSAT
VGNADELATWLEAELVVSEWRPTELLEGVFFNGTFYCKDREKTVEQSTKDEAVNLALDTL
KKDGQCLVFESSRKNCMAFAKKAASTVNKTLSAEDRKVLAGIADEILENSETDTSTNLAA
CIRSGTAFHHAGLTTPLRELVEDGFRAGKIKLISSTPTLAAGLNLPARRVIIRNYRRYSS
EDGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLVAKSYKEFVFLFENYIEANAEDIWSKLG
TENALRTHVLSTISNGFARTYDELMDFLEATFFAFQYSNFGLSTVVNECLTFLRQEGMIE
KTDALIPTSFGKLVSRLYIDPLSAARIAKGLKEAKSLSELTLLHLVCSTPDMRLLYMRSH
DYQDINDYVMAHASEFVKVPSPFDTTEYEWFLGEVKTSLLLLDWVHEKSENEICLKFGTG
EGDIHSIADIAEWIMHVTAQLAGLLDLKGAKEAAELEKRIHYGAAPELMDLLDIRGIGRV
RARKLYEAGFRSSAELAGVDPEKVAALLGPKIADRIFKQIRNRGTLSGITESEPPTGPES
SEKSPYSGQKTINDY
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaaagtctcgatctgcccgacgaagtaaagcggttttatctcgattccggg
attctggaactttatccccctcaggctgaagctgtggaaaaagggctgcttgaaggaaga
aatctgcttgctgcaatccctacagcttcagggaagactctccttgccgagcttgcaatg
ttgaagtccatcctggcaggaggaaaggcactctatattgtgcctctcagagctcttgct
tccgagaaattcaggcggtttagggaattttcggaacttggaattagggtcgggatctct
acaggggactatgacatgcgggacgagggactcggagtgaacgacattattgttgcgacc
tccgagaaaaccgattccctgctcaggaatgagactgcctggatgcaggaaatttcggtt
gttgtggcagacgaggtgcatcttatagactcgccggataggggcccaacgcttgaggtt
acccttgcaaagcttcggaaaatgaactcttcatgccagatccttgcactgtctgcaacc
gtcgggaatgccgacgaactcgcaacctggctggaagccgagcttgtagtaagtgaatgg
aggcctactgagcttcttgagggagtattctttaatgggaccttctattgcaaagatagg
gaaaaaactgttgagcagtccacaaaagacgaagctgtgaaccttgcactggataccctc
aaaaaagatgggcagtgcctggttttcgaaagcagcagaaaaaactgcatggcctttgca
aaaaaggcggcttcaactgttaataagaccctttccgcagaagacaggaaagtccttgca
ggaattgcagacgagatccttgaaaacagtgaaaccgatacttcaacgaaccttgcagcc
tgtattcgttcaggcacggcttttcaccacgcaggccttacaacgcctttaagagaactt
gtggaggacggtttcagggctggaaagataaagttgatttcgagcacgcctacccttgca
gccgggctcaacctgcctgctcgacgcgtaattatccgaaattatcggcgctattcctct
gaagacggaatgcaacctattcctgtgctcgagtacaaacagatggcaggcagggcaggt
aggccaaggcttgacccgtatggagaagccgtgcttgttgcaaaatcatataaggagttt
gttttcctttttgaaaattatatagaagccaatgccgaagatatctggtccaaactcgga
accgaaaatgctctcaggacccatgtgctctctacgatctctaacggttttgcgcggaca
tatgatgaactcatggattttcttgaggcaacatttttcgctttccagtactcgaacttc
gggctttctacggttgtgaacgaatgccttacctttttgcgtcaggaagggatgattgag
aaaaccgatgcccttattcctacaagcttcggaaagcttgtctcaaggctttatatcgac
cccctgtcagccgcccggattgcaaagggcctgaaagaagcaaagagcctgagcgagctt
accctgcttcatctggtgtgcagcacacctgacatgcgcctgctttacatgcggagccac
gattatcaggacatcaatgattatgtaatggctcatgcgagcgaatttgtaaaggtgccc
agtccctttgatactacggaatatgaatggttccttggggaagtcaagacttccctcctt
ctgcttgactgggtccatgaaaaatctgaaaacgagatttgcttaaagttcggcaccggg
gaaggtgacattcattcaattgcggatattgcggaatggataatgcacgtcaccgctcag
cttgccgggctccttgatctcaaaggtgcaaaagaagccgcagaacttgaaaagcggatt
cattacggagcagcccctgaacttatggatctgctcgatatcagaggcatagggcgcgtg
agggcaaggaagctctatgaagcaggcttcagatcctcagcagagcttgcgggagttgat
cctgagaaagtggctgctcttcttgggccaaaaattgcagaccggattttcaagcagatc
aggaacagagggacattgtctggaattactgagtctgagcctcctactgggcctgaatct
tctgagaaaagtccgtattcagggcaaaaaacaattaatgattattga
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