Methanosarcina sp. Kolksee: MSKOL_2169
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Entry
MSKOL_2169 CDS
T03821
Name
(GenBank) tRNA pseudouridine 55 synthase Archaea
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mek
Methanosarcina sp. Kolksee
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mek03016
]
MSKOL_2169
Enzymes [BR:
mek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSKOL_2169
Transfer RNA biogenesis [BR:
mek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSKOL_2169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
MCM4_WHD
Motif
Other DBs
NCBI-ProteinID:
AKB47946
UniProt:
A0A0E3LJK8
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All DBs
Position
2806180..2807475
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AA seq
431 aa
AA seq
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MDVLDISKKILHEGPICDNCLGRQFAKLSTGLSNRERGQALKLALVLEGDRIYKAENDDS
LLKELAPCSVFARKALGTESEDEQCWVCLDQFKKLDEWADEAAKALEGLEYSTFLVGTKV
SGLLSENEELLWAEAGTAYAEQLKTELNREVGKRIAEKVHKDVDFENPDITITLDLGKNE
LDLQLRSVYILGRYRKLIRGIPQTRWPCRKCKGKGCERCNFTGKQYQESVDELIKGPVVE
AFQANDTAFHGSGREDIDALMLGSGRPFVVEAKSPVKRSTDLEELMRNINEKASGKVEVR
EFSFTGKDMIETLKSSKADKTYKLKVTFKEPVSEEKLKSSLEALSDIEISQQTPTRVVHR
RADLVRKRHVHRIKLDELTDDGYAYITVNCEGGLYVKELVSGDEGRTNPSLSGLLGIPAL
VEDLDVVNVDI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggacgtactcgatatttcaaaaaagattttgcatgaaggcccgatatgtgacaactgt
ctgggccgtcagtttgcaaaattatccacaggcctgagcaatagagaacgtgggcaagcc
ttgaaactcgcccttgtcctggaaggggaccggatctataaagctgaaaacgatgattct
cttctcaaagaacttgctccttgcagtgtatttgcgagaaaggctctaggaacagaaagc
gaagatgaacagtgctgggtctgccttgaccagtttaaaaagctggatgaatgggccgat
gaagctgcaaaagcccttgaagggcttgaatattctacctttcttgtaggcacaaaggtc
agcgggcttcttagtgaaaacgaggagctgctctgggctgaggctggaactgcatatgcc
gaacagcttaagaccgagcttaatagggaagttggcaagcggatagcagagaaagtccat
aaagacgtggatttcgaaaaccctgatattacaatcacccttgaccttggaaaaaacgag
cttgatctccagctccgctcggtatatattctagggcgctaccgcaaacttatcagggga
attcctcagacacgctggccttgcaggaaatgcaagggaaaaggatgtgagcgctgtaat
tttacagggaaacagtatcaggaatccgtagatgagctcataaaagggcctgtagttgag
gctttccaggccaatgatacggcttttcatggctcgggcagggaagatatcgatgccctg
atgctgggaagtggcaggccttttgtagtagaagcaaaatctcctgtaaagcgaagcaca
gaccttgaagaacttatgcgaaatattaatgagaaagcttccggaaaagttgaggtaaga
gagttttctttcactggaaaggatatgattgagaccttgaaaagctcaaaggcggataaa
acttataagcttaaagttacatttaaagagcctgtttcggaggaaaagcttaaatccagc
cttgaggctttgagtgacatagagatctcacagcagactccaacgcgggtagttcacagg
cgggctgaccttgtcagaaaaaggcatgtgcaccgtatcaagcttgacgaactgacagac
gacggttacgcttacataacagtaaactgcgaaggcgggctgtatgtaaaagagcttgtt
tccggagatgagggcaggacaaacccgagcctgagcggacttttagggattcctgcgctt
gtagaagatcttgatgtggtcaacgttgatatttaa
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