Methanosarcina sp. Kolksee: MSKOL_2416
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Entry
MSKOL_2416 CDS
T03821
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSKOL_2416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mek03021
]
MSKOL_2416
Enzymes [BR:
mek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSKOL_2416
Transcription machinery [BR:
mek03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSKOL_2416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DmmA-like_C
RNA_pol_Rpb2_45
DUF1451
Motif
Other DBs
NCBI-ProteinID:
AKB48193
LinkDB
All DBs
Position
complement(3129071..3130885)
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AA seq
604 aa
AA seq
DB search
MTKAKVFINGELVGTHDNPAELVDELRKMRRQGFISRQVNVALNSSTREVIINSDMGRAR
RPLLVVENGALKVTPEHVEKIKNKEINFDDLVKEGCIEYLDAEEEENAYIGLYEADLTPK
HTHMEIDPELILGISTGMVPYPEHNASPRNTMGAAMIKQCIGVATANQKLRPDTRAHVLH
YPQRAMTRTRTSEAIGFDDRPAGQNFVVAILSYEGYNIEDALIFNKGSIDRGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEYRGARSAEAYANLDTDGLVNPETPVGPNDVLIGKTSP
PRFLEEPSDFGISVEQRRESSITMRSNETGIVDTVILTESINGTRLAKVKVRDERIPDIG
DKFASRHGQKGVIGLKVPIADMPFTESGLTPDLMINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVNATAFSGENEEDLREALKKHGFAHTGKEIFYDGATGKMIPADVFVGVILYQKLHH
MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK
VVELVCSHCGMIATYDKQRNVAFCSTCGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLKL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcaaaagtattcataaacggggagcttgtcgggacccacgataaccctgcg
gaacttgtggacgagcttagaaagatgaggcggcaggggttcatatctaggcaggtcaat
gtcgctcttaacagcagtacaagagaagtaattataaactccgacatgggcagagcaaga
aggccccttctagttgtggagaacggagctctcaaggtaactccagagcacgtagagaaa
attaagaacaaagaaatcaactttgatgacctggtaaaagaaggctgcatagagtatctc
gatgccgaagaagaggaaaatgcctacataggactctatgaggctgaccttactccaaag
cacactcacatggagattgatcctgaacttattcttggaatctctacgggaatggtgcct
tatcctgaacataatgcatctccgcgtaacaccatgggtgcagccatgatcaaacagtgt
atcggggttgcaaccgcaaaccagaagctcagacctgatacacgggctcatgtccttcat
taccctcagagagcaatgaccagaaccagaacctctgaagcaatcggttttgatgacaga
cctgcgggccagaactttgtggtcgcaatcctgtcctatgaagggtataacattgaagac
gccctgattttcaataaaggctcaattgatagaggcctcggaagaagtcacttcctcagg
acttttgaaggagaagaacgcaggtatccgggtggacaggaagataagttcgagatccct
gactccgaataccgtggagcgcgcagtgcagaagcctatgcgaacctggatacagatggg
cttgtaaatcctgaaactccggtaggccccaacgacgtgcttatcggaaagaccagtcca
ccaaggttccttgaagaaccatcagacttcgggatttcagtcgagcagaggagagaaagc
tcgatcacaatgcggtcaaatgaaaccggaattgttgacacggttatcctgactgaatcc
attaacggaaccaggcttgccaaagtaaaagtaagagatgaaaggattcctgacattggg
gacaaattcgcttcaaggcacgggcaaaaaggagttatcggcctgaaagtcccgattgca
gatatgccgtttacggaatccggcctgactccggacctgatgatcaacccacatgcaatt
ccttcccgtatgactgtaggtcacgtcctggaaatgattgggggaaaagtaggttctatg
gaaggcagacgggttaatgcaacagctttctcaggggagaacgaagaagacctcagagaa
gccctgaaaaagcatgggtttgctcataccggaaaagaaattttctacgatggagcaacc
ggcaagatgatccctgcagatgtctttgttggggttattctctaccagaaactgcaccac
atggttacttcgaagatgcacgcacggtcccgtggacctgtacaggtgcttactcgccag
ccaaccgaaggccgagccagagaaggtggtctcagattcggagaaatggagcgtgatgtg
ctggtagggcacggagctgccatgtcattaaaagaaaggctgcttgacgagtcggacaag
gttgtggaacttgtctgctctcactgtggaatgattgcaacgtatgataagcagcgaaat
gtcgctttctgctcaacttgcggggctgacacggatatataccctgtggaaatgagctat
gcattcaagctgctgctggacgaaataaaatccctgggagttgcgcccaggcttaaactt
gaagatgcggtatga
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