Methanosarcina sp. Kolksee: MSKOL_2489
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Entry
MSKOL_2489 CDS
T03821
Name
(GenBank) Thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek00730
Thiamine metabolism
mek01100
Metabolic pathways
mek01240
Biosynthesis of cofactors
Module
mek_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSKOL_2489
Enzymes [BR:
mek01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
MSKOL_2489
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
AKB48266
UniProt:
A0A0E3LJS2
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Position
complement(3223059..3224345)
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AA seq
428 aa
AA seq
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MTLMEDAKKGIITPSIEAVAKAEGIDPETVRSCVAKGLITIPVNNRRETLPIGIGKYMST
KINANIGTSRDYIDIDAEIEKAKAAETFGAHAVMDLSTGGNLDEIRTQILKSVNIPVGTV
PIYQAAASRKVVVEMTSDDMFNAVRKHAEQGVDFVTVHAGVNLNSLERLRQSDRIMNVVS
RGGSFTLAWMLHNGEDNPFYAEFDYLLEIAKEYDMTLSLGDGMRPGCIADASDRPKFMEF
ITLGELVKRARAVDVQTFVEGPGHVPLNEIELSVRGMKELCNGAPLYLLGPLVTDIAPGF
DHITGAIGGAVAGMHGTDFLCMVTPSEHLALPALEDIKEGLLVTKVAAHTIDLIKEGPRE
RAWEKDLAMAYARRDLDWEKQFELAIDGNRARKIRDARKTESDTCSMCGNLCALKIVKEA
FEKKKMEE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacactgatggaagatgcgaagaagggaatcatcacaccctctatagaagccgtggca
aaagctgaaggaattgaccctgagactgtccgctcctgcgtggcaaaagggctaatcact
atccctgtaaataacaggcgagagacccttcctataggtattggcaagtatatgagcaca
aagatcaatgccaatatcgggacatcgagagactatatagacattgatgccgaaatcgaa
aaagcaaaggccgcagaaactttcggcgctcatgccgtaatggacctttctacaggcgga
aatctggacgaaattcgcactcaaatcctgaaatctgttaacattccagtcggaacggtc
ccaatctaccaggctgcagcttccaggaaagttgttgtggaaatgacttcggatgatatg
ttcaatgccgtccggaaacatgccgaacagggagttgactttgttaccgttcatgccggg
gttaacttaaactcacttgaacggctgcgccagagcgacaggatcatgaatgtcgtgagc
cgtggaggctcttttacccttgcctggatgctgcataacggagaagacaaccccttctat
gccgaatttgattatctccttgaaatcgcaaaagaatatgatatgaccctgagccttgga
gacggcatgcgtcccggctgtattgccgatgcctctgaccgcccgaagtttatggaattt
atcacgctcggtgaactcgtaaagcgggcaagagctgtcgatgtccagacctttgtagaa
ggtccgggccatgtgcctttgaacgaaatcgaactcagcgttaggggcatgaaagagctc
tgtaatggtgctcctctctatcttctgggcccgcttgtgactgatattgctcccggcttt
gatcacattacaggcgctatcggaggagcagttgcagggatgcacggcacagatttcctc
tgcatggtaactccttcggaacaccttgcccttccagcccttgaggatataaaagagggc
ctcctcgtaacaaaggttgcagcccacactattgaccttataaaagaaggcccgagagaa
cgcgcctgggaaaaagatctggcaatggcatatgcccgcagggaccttgactgggaaaaa
cagttcgaactggcaatcgatggcaacagggcccgcaaaatccgggatgccagaaaaact
gaaagcgatacctgctcgatgtgtgggaatctctgtgccttgaaaattgtaaaggaggct
tttgagaaaaagaaaatggaagaatga
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