Methanosarcina sp. Kolksee: MSKOL_3011
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Entry
MSKOL_3011 CDS
T03821
Name
(GenBank) O-antigen export system permease protein RfbD
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSKOL_3011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mek02000
]
MSKOL_3011
Transporters [BR:
mek02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
MSKOL_3011
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Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
Caud_bapl16_2nd
Motif
Other DBs
NCBI-ProteinID:
AKB48788
UniProt:
A0A0E3QG61
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All DBs
Position
3909635..3910402
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AA seq
255 aa
AA seq
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MNIGLILELAKRDITEKYSGSTLGALWNFIYPLVDIFIFTVIFANLMGSRLPGSSSVYAY
GFYLTSGVIAWNAFSNTVTRTSSVFLDKKYIISKVKVDLSSFPLYIAVSESITYVVTMGI
FLFLLLISGYGISRVILVVPFIYIIQQIFAYSLGFFIGVFVVFVRDLKEVVGIVLKIWFW
FTPIVYLYDVLPDVVKKLMNYNPAFSFIHLYQTIFIYKEIPSLKPILYLLLLSFVILFFA
EIIFKKLEKDIRDFI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
ttgaatataggtttaattcttgaattagcaaaaagggatattactgaaaagtactccgga
tctactttaggagctttgtggaactttatttatccacttgtggatatttttatatttacc
gtcatatttgctaatcttatgggatcgcgtttgcctggttcgtcttcggtctacgcttat
gggttttatcttacttctggtgtaattgcatggaatgctttttcgaatactgtcacaagg
acatctagtgtttttttagacaagaaatatatcatatccaaagttaaggttgatctgtcc
tcatttcctctctatattgcagtttcggagagtattacttatgttgtgacaatgggaata
ttcctgtttttacttctaatcagtgggtatggaataagccgtgtaattctagtagtccca
tttatatatattatccagcagatcttcgcttattcccttggattttttattggagtattt
gttgttttcgtaagggacttaaaagaagttgtaggaattgtacttaaaatctggttttgg
tttaccccaatagtatatctttatgatgtactcccagatgttgtaaaaaaactcatgaat
tataatccggcgttttcattcatccacctgtatcaaactatatttatatataaagaaatc
ccgagtttaaaacctattttatatttgcttttgttaagttttgtaattctattctttgca
gaaattatcttcaaaaaactggaaaaagatattcgagatttcatataa
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