Methanosarcina sp. Kolksee: MSKOL_3026
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Entry
MSKOL_3026 CDS
T03821
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSKOL_3026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mek03019
]
MSKOL_3026
03009 Ribosome biogenesis [BR:
mek03009
]
MSKOL_3026
04131 Membrane trafficking [BR:
mek04131
]
MSKOL_3026
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mek04147
]
MSKOL_3026
Messenger RNA biogenesis [BR:
mek03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSKOL_3026
Ribosome biogenesis [BR:
mek03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSKOL_3026
Membrane trafficking [BR:
mek04131
]
SNARE
SNARE associated proteins
Others
MSKOL_3026
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSKOL_3026
Exosome [BR:
mek04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSKOL_3026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
TIP49
AAA_22
CDC48_2
AAA_33
AAA_14
nSTAND3
IstB_IS21
NACHT
Sigma54_activat
NPHP3_N
Mg_chelatase
RNA_helicase
AAA_28
ABC_tran
Parvo_NS1
AAA_24
AAA_7
AAA_18
Vps4_C
TsaE
Zeta_toxin
ATPase
NB-ARC
AAA_11
AAA_17
AAA_3
AAA_25
PhoH
bpMoxR
ORC-CDC6-like
Sigma54_activ_2
SLFN-g3_helicase
ResIII
KAP_NTPase
DUF815
Clathrin
Motif
Other DBs
NCBI-ProteinID:
AKB48803
UniProt:
A0A0E3QGK5
LinkDB
All DBs
Position
complement(3928653..3930947)
Genome browser
AA seq
764 aa
AA seq
DB search
MTNGDEKTIKLKVAEANHRDVGKGIVRIDEAFREKLGLNPFDVVEIRGGKVTSALIGRPY
PDDEGLDIIRMDGLIRTNAKTSIGEYVEICKAEWKEAKHVTLSPVKRGIKIYAPSETLSA
VFMNRTVSKGDFISTTSLSSSRDMDTYGKGLMLDEFFQDFFRQGFGSSFGLGEIKLQVVS
TSPSGIVKITDMTEIELLPEAREITPEQAIPTVMYEDLGGLQDAILKVREMVEIPLKYPE
LFDRLGIEAPKGVLLHGPPGTGKTMLARAVASESDAYFISINGPEIMSKYYGESEKAIRD
IFDEAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKSRKNVIVIGATN
RPEALDLALRRPGRFDREIELRVPSTEGRLEIFHIHTRGMPLTEDVNLMDLAQITYGFVG
SDIAALCREAAMRALRRVFPRIDLKEPHIPKEILDSLQVTRADFEEAMKDVQPSAIREIL
IEIPNISWNDVGGLEDVKCLLKEAVEWPLKNPESYRHIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIVFLDELDSLAPIRGI
SAGEPQVTARILNQLLSEMDGLEELKGVVVIGATNRPDIIDPALIRPGRFDELILVPVPD
KGARREILKVHTKKMALAEDVDIEELVARTDNYTGADLAAICKKAGRYALREELHADNVK
QKHFLKAVSETRPSVTPDTMKYYEAIKGEIITRKSKEIENPLYI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgactaatggagatgaaaagacaatcaaactgaaagttgcagaagctaaccatcgtgac
gtcggaaaaggtatagttcgtatagatgaagccttcagggaaaagcttggtttaaacccc
tttgacgttgtggaaatcagagggggaaaggtgacctcagctcttataggaagaccttat
cctgacgatgagggtcttgatatcatccgtatggacgggcttatccgcacgaatgcgaag
accagcataggagaatacgtggaaatctgcaaagcagaatggaaagaagcaaaacatgtg
accctctctcctgtaaaaaggggaataaagatttatgctcccagtgagactcttagtgct
gttttcatgaaccgtacggtttcaaaaggggattttatctccaccaccagtttaagtagc
tctcgagatatggatacttatggcaaaggactcatgttggatgaatttttccaggacttt
ttcaggcagggcttcggctcctctttcgggctcggggaaatcaagcttcaggttgtttct
acctctccgtcggggatagtaaagatcactgacatgaccgaaattgaactcctgccagaa
gccagggaaattactcctgagcaggccattccaactgttatgtatgaagatctgggtgga
ctccaggatgcaattttaaaggtcagggaaatggtagaaatccctctgaaataccctgaa
ctttttgatcggttagggattgaagccccaaaaggagtgttgctccatggccctcccggt
actggcaagactatgcttgcaagggctgttgcaagtgagtctgatgcttattttatctct
atcaacggcccggaaataatgtccaaatattacggggagtccgaaaaagctatccgcgat
atattcgatgaggctgaaaagaatgcaccagcaatcatctttctggacgagatcgattcc
attgccccgaaaagagctgaggtcacaggggaagttgagaggagagtggtcgcacagctc
ctttccctgatggatgggctgaaaagccgcaagaatgtaatcgtgataggtgcaacgaac
cgccctgaagctctggatctggcactgcgccgcccgggcaggtttgacagggaaattgag
ctcagggtcccgagtaccgaaggcaggctcgaaattttccatattcatacgagaggaatg
ccccttacagaggacgtaaacctcatggatcttgctcaaattacctatgggtttgtgggg
tctgatattgcagcactctgccgggaagctgccatgagagctcttaggcgtgtcttccca
aggattgatctaaaagaacctcatatcccaaaagaaatcctggattcattacaggtcaca
agagcagacttcgaagaggccatgaaagacgtgcagccctcagccatccgggaaatactt
attgagattcccaatatcagttggaatgatgttggcggcctggaagacgtaaaatgtctc
ctgaaagaagctgtagaatggccacttaaaaaccctgagtcttatcggcatataggtgtg
gaagctccaaaaggcgtactcctatatggtcctccgggcactggaaagacccttctggca
aaagccattgcccatgagtcagatgccaactttatcactgccaaaggaagcgaccttctt
tccaagtggtatggagagtctgaaaaaaggattgctgaggtcttcaccagggcgagacag
gttgccccttctattgtttttctggacgaacttgactcacttgctcccatccgtgggatc
tcagcaggtgagcctcaggttacagccagaatccttaatcagcttctttccgaaatggat
gggcttgaagaactcaaaggagtggtagtgatcggtgcaactaaccgccctgatatcata
gacccggctttgattcgtccagggcgttttgatgagcttattctcgtcccggtccctgat
aaaggagctagaagggaaattctcaaggttcacacaaagaagatggcccttgcagaagat
gtggatatcgaggaactcgttgcccgtaccgataattacacaggcgcagatcttgcagca
atatgtaaaaaggcaggaagatacgccctgcgtgaagaacttcatgcagacaatgttaaa
cagaaacatttccttaaagcagtttcagagacacgaccttcagttacccctgatactatg
aaatactatgaagcaataaaaggagaaatcataaccaggaaatcaaaggaaatagaaaat
cccttatatatatga
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