Methanosarcina sp. Kolksee: MSKOL_3063
Help
Entry
MSKOL_3063 CDS
T03821
Name
(GenBank) cell surface protein
Organism
mek
Methanosarcina sp. Kolksee
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
NosD
Beta_helix
InlK_D3
Big_13
Bact_surface_Ig-like
K319L-like_PKD
Motif
Other DBs
NCBI-ProteinID:
AKB48840
UniProt:
A0A0E3QGN6
LinkDB
All DBs
Position
3983415..3986330
Genome browser
AA seq
971 aa
AA seq
DB search
MDGGIKIKKLNTLLVAIFILALISSLGAATEIIVQPGDSIQTAVNSSSSGDIITINPGTY
IENIIVTKNDLTIRSKSGNPDNTIIKAKSSGANVFLLQGDNIKISGLKAVGATRSGYSGI
CLSSCSNCVIENNKLLSNCYGIYLLRSKGDKLSKNTATNNLQYGIVLGTATDNTISGNIA
LNNGRGIHIGNSDGNTLSGNTVQNNNIYGFYICGKSDTNKIYNNYFNDTNMTIKNGIGNS
YNTKKTAGTNIVGGPYIGGNFWGKPNGTGFSNTAVDNDRDGISDSAYKNIAGSIYSDNLP
LVVYKPKSTKPVAAFSASPTSGKAPLNVKFTDKSTGTPTYWYWNFGDGSKSYLQNPTHKY
SKAGAYNVSLIVKNAAGRSTVTKTGYIKVISKPVAAFSASPTSGKAPLNVKYTDKSTGIP
ASWYWNFGDGSKSYIQNPVHKYSKAGTYTVSLIVKNAAGRGAVTKTGYIKVTGTSQTSTA
ALFASSTPTAALSASPTSGKTPLTVDFTDNSTGSPTSWKWDFGDGTDSTEQSPTHTYSAA
GTYTVKLTATNTAGSNTVTKPNYITVTATSQTLTETSQTPVADFWASSLSGKAPLNVTFT
DTSTGSPTSWEWDFGDGTYSTEQSPAHTYSAAGTYTVKLTATNAAGNSTKTKSNYITVTG
ASQTLTETSQTLTETSQTLTETSQTPVADFWASQLSGKAPLDATFTDTSTGSPTSWEWDF
GDGTDSTEQSPTHTYSAAGTYTVKLTATNEAGNSTKTKSNYITVTGNSQTLTATSQTLTE
TSQMPVADFWASQLSGNAPLDTTFTDTSTGSPTSWEWDFGDGTDSTEQSPTHTYSAAGTY
TVKLTATNEAGNSTKTKSNYITVTGASQTLTETSQTLTETSQTLTETSQMPVADFWVSPL
SGTAPLDATFTDTSTGSPTSWEWDFGDGTDSTEQNPTHTYSAAGTYTVKLTATNAAGSGT
KTKSNYIKVAK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggaattaaaataaaaaaattaaacactttgttagtagctattttcatatta
gcattaatatcaagtcttggagctgcgactgagattatagtgcagccaggagattctatt
caaactgctgtaaatagttcgtcttcgggcgatataattactataaatcccggaacctat
attgaaaatatcatagtaactaaaaatgatcttacaatccggtcaaaatcaggaaatcct
gataacacaataattaaagccaaaagttcaggggctaatgtgttcctcctgcagggagac
aacataaagatatctggacttaaggctgtaggagcaacccgatccggctattcaggaatc
tgtctatcttcatgcagtaactgcgtaatcgagaataacaaacttttgagcaattgttat
ggaatctatctcctgcgttccaaaggggacaagctgtcaaagaacacggctacaaataat
ctacaatatggaattgtacttgggactgctacagacaataccatttcaggaaatatagcc
cttaataatggtcgtgggatccatattggcaactctgacggtaacacactctcaggcaac
accgttcaaaacaacaatatttatgggttttatatctgtggcaaaagtgacacaaacaag
atctacaacaattatttcaatgacaccaatatgactattaaaaacggaatcggaaattcc
tataacactaaaaaaaccgcaggtactaatattgtgggcggcccttacataggaggcaac
ttctggggaaaacccaatggtacaggattttccaatactgcagtagataacgatagagac
ggaatttccgattctgcatataaaaacatagcaggcagcatctattctgacaatcttcct
ctagttgtctataagcccaagtcgacaaagccggttgctgcattttctgcatctcctaca
tccggaaaagcaccattaaacgttaaatttactgacaaaagtacaggaacacctacttac
tggtactggaactttggagatggatcaaaatcatacctccagaatccgactcataagtat
tcgaaggcaggggcctataatgttagcttaatagtaaagaatgctgcaggacgtagcacg
gtaacaaaaacaggatatataaaagtgatatcaaaaccagttgctgcattctctgcatct
cctacctccggaaaagcaccattaaacgttaaatatactgacaaaagcacaggaatacct
gcttcatggtactggaactttggagatggatcaaagtcatacatacagaatccggttcat
aagtattcgaaggcagggacctatactgttagcttaatagtaaagaatgctgcaggacgt
ggcgcggtaacaaaaacaggatatataaaagtgacaggaacttcgcaaacttcgacggct
gcactttttgcgtcttcaactcctactgctgcactttctgcatctccaacttcaggaaag
actccactaaccgttgactttactgataatagtacgggctcaccaacttcatggaaatgg
gattttggagatgggacagattcaacagaacagagtccgacacatacatattcagctgca
ggaacttacacggttaaacttacagcaacaaatacagcaggaagtaacactgtaacaaaa
ccaaattatattacagtaacagcaacgtcacaaacactgacagaaacttcgcaaacacct
gttgcagacttctgggcttcttcactctcaggaaaagcaccactaaatgtaacatttacg
gatacaagcacaggatctccaacttcatgggaatgggattttggagatgggacatattca
acagaacagagtccagcacatacatattcagctgcaggaacttatacggttaaacttaca
gcaacaaatgcagcaggaaatagtacaaaaaccaaatcaaattacattacagtaacagga
gcttcacaaacgctgaccgaaacttcgcaaacactaaccgaaacttcgcaaacgctgacc
gaaacttcacaaacacctgttgcagatttctgggcatctcaactctcaggaaaagcacca
ctagatgcaacgtttacggatacaagcacaggatctccaacttcatgggaatgggatttt
ggagatgggacagattcaacagaacagagtccgacacacacatattcagctgcaggaact
tacacggttaaacttacagcaacaaatgaagcaggaaatagtacaaaaaccaaatcaaat
tacattacagtaacaggaaattcacaaacgttaacagcaacatcacagacgttgaccgaa
acttcacaaatgcccgttgcagatttctgggcatctcaactttcaggaaatgcaccacta
gatacaacgtttacggatacaagcacaggatctccaacttcgtgggaatgggattttgga
gatgggacagattcaacagaacagagtccaacacacacatattcagctgcgggaacttac
acggttaaacttacagcaacaaatgaagcaggaaatagtacaaaaaccaaatcaaattac
attacagtaacaggagcttcacaaacgctgaccgaaacatcgcaaacactaaccgaaact
tcgcaaacgctgaccgaaacttcacaaatgcctgttgcagatttctgggtatctccactc
tcaggaacagcaccactagatgcaacatttacggatacaagcacaggatctccaacttca
tgggaatgggattttggagatgggacagattcaacagaacagaatccaacacacacatat
tcagctgcaggaacttacacggttaaacttacagcaacaaatgcagcaggaagtggtaca
aaaactaaatcaaattatataaaagtagcaaagtga
DBGET
integrated database retrieval system