Methanosarcina sp. Kolksee: MSKOL_3113 Help Entry MSKOL_3113        CDS       T03821                                  Name (GenBank) Putative ski2-type helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism mek  Methanosarcina sp. Kolksee Brite KEGG Orthology (KO) [BR:mek00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mek03400]     MSKOL_3113 Enzymes [BR:mek01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      MSKOL_3113     5.6.2.6  RNA 3'-5' helicase      MSKOL_3113 DNA repair and recombination proteins [BR:mek03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     MSKOL_3113 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD Helicase_C WH_Lhr ResIII T4SS-DNA_transf FAT Con-6 Motif Other DBs NCBI-ProteinID:  AKB48890 UniProt:  A0A0E3QGS3 LinkDB All DBs Position complement(4054209..4057076) Genome browser AA seq 955 aa AA seqDB search MTFHNIFNTFHPKIQEAIKTLGFTKPTEPQERSFPHIMDGKHTLLIAPTGSGKTESAVLP VFDSILKKKPEARKGISALYITPLRALNRDMLSRIEILGQLLDIKVQVRHGDTPQSERQR QSKNPPDVLITTPETLQAMFTGSRLRQNLETITHVVIDEIHELAGSKRGTQLAVGLERLV EISGEFQRIGLSATVGNPWEIAKFLAGNGRDFTVIEVALLKLLEFDVVNPQVSEKGKIRE KEVLEIAKTVGCEPEFASHLLCIRKIVEDSQSTLIFVNTRQSAEALAAGFRKLGTSIGVH HGSLSFEARVEAEEAFKSGALKGLICTSSMELGIDIGNVDRVVQYGSPRQVSRLLQRVGR AGHKLHSISWGTIISMEVDDTAESMAITKAALEGRVEEVSPHIKSLDVVANQIAGMVMDF GEIEIEKILKILQRTYPFRDLRLEELQRVVDQIGDYKLVWREKGLNIVKRRRKSREYYYE NLSMIPDEKKYEIYDIVSGKSVGVLDEAFVVNFAEPGAVFITKGYMWRVVEMPDREQGKD RIKVEPVEGTGEVPSWTGEEIPVPFEVAQDVGKLRAEIAAFIRAELDDESIAEKLQAKYP VARNAVLELVRLVREHVEGGFPLPDADTIVIEDEGDAVTLNACFGHNTNGTLARVLTSLL SARFGSSVAQEVDPYRIKLTLPRRVGSFQIRDMLLSLRPEHVEPIIEMTLKNTMLMKWKM VHVARKFGALSRDVDYDRISMKKLLEIYQGSSMYDEVIREIFHDLLDVPRTKEVLKRLAA GEISVEVSLPTPIGSAGFAMKKDLVAPEKADRSIVLALKERIMNDRIILFCTNCKKWTSR RQVKNVPEEIICPVCESRMIAALKPWEEEEINLVKKQAKKVKVSPEEKKRIQRVYRNASI VRSQGKKAVIALASRGVGPDTASKVIEKMRVDEEAFYRDILVAERNYVKTKKFWE NT seq 2868 nt NT seq  +upstreamnt  +downstreamnt atgacatttcataacatctttaacacttttcatccaaagattcaggaagccatcaaaact cttggctttacaaaacccacagaacctcaggaaaggtcatttcctcacataatggatgga aagcatactcttttgatagctcctacgggttcaggcaagaccgaatcagccgtgctgcct gtttttgacagtatcctgaaaaagaaacctgaagccagaaagggaatttcagccctttac ataactccattgagagcacttaacagggatatgctttctcgtattgaaatcctcgggcag ttgctcgacatcaaagtccaggttcggcatggtgatactccgcaaagtgaaaggcagcgc cagtcgaaaaatccccctgatgtactgatcactactcctgagaccttgcaggcaatgttt accggctcccgcctgcgccagaaccttgaaaccataactcatgtcgtgatagacgaaatc catgagcttgcaggttcaaaacgtggaactcaactggctgttgggcttgagagacttgtg gaaatttcaggagagttccagagaatcgggctttctgcaacagtcgggaacccctgggaa attgcaaagttcctagcaggtaatggaagggattttactgtaattgaggtagccctgttg aaactgcttgaatttgatgtggtcaaccctcaggtttcagaaaaaggaaagataagggaa aaagaagtcctggaaattgcaaaaacagttggttgcgagcccgaatttgcatctcacctg ctctgcatccggaaaattgtcgaagatagtcagtccactcttatttttgtaaatacgagg cagagtgccgaagctttagctgccggttttcggaaactcgggacatccataggtgtacat cacggctcgctttcttttgaagcccgtgtggaagctgaggaggcgttcaaatcaggagcc cttaaaggccttatctgcacctcgtcaatggagcttggaatcgatataggaaacgtcgac cgggtagttcagtacgggtctccgcgccaggtttcaaggcttctccagagagtcggaaga gccgggcataagctgcattcgatttcctggggtactataatttctatggaagtcgacgat actgcagaaagtatggcaattacgaaagctgcactggaaggcagggtggaagaagtttct ccgcatataaaatccctggacgtcgtggcaaatcagatcgcgggcatggttatggatttt ggggagattgaaattgagaaaattctcaagattcttcaacggacttacccattcagggat ctgcggcttgaggaactgcaaagagttgtggaccagataggggattacaaactggtctgg cgtgaaaaaggtttaaatatcgtcaaaagacgcaggaaaagccgtgaatactattacgag aacctttccatgatcccggacgagaaaaagtacgagatctatgatattgtaagcggaaaa tcagtcggcgtgctggacgaagcctttgtcgtaaattttgcagaacctggtgccgttttc ataacgaaaggctatatgtggcgggtcgttgagatgcctgaccgcgagcagggaaaggac agaatcaaagtcgaacctgtggaaggcacaggtgaggttccgagttggaccggtgaagaa atccctgtgccttttgaagtagcccaggatgtaggaaagctaagggcggaaattgcggct tttattcgggcagaacttgatgatgaatcaattgccgaaaaactccaggcaaaatatccc gtagcaaggaatgctgtgcttgaactggtccgccttgtgcgtgaacacgtcgaaggaggc ttccccctccctgatgcggatacgattgtgattgaagacgaaggagatgctgtaaccctg aacgcctgttttggccataatacaaatggtacccttgccagggttctgacctcgcttctt tcagcccgcttcggaagcagtgtagcccaggaggtggacccctacagaataaagctgacc ctcccaaggcgtgtaggctcttttcaaatccgggacatgctgctttccctccgccctgaa cacgttgagccgatcatagaaatgaccctgaaaaacacaatgctgatgaaatggaaaatg gtccacgttgcccgaaaattcggagccctatccagagacgttgattacgaccggataagc atgaaaaagctgctggaaatataccagggttcctcaatgtatgacgaagtcatccgggaa atcttccacgacctgcttgacgtcccgaggacaaaagaagtccttaaaagacttgcagcc ggcgaaatttcagttgaagtgtccttgccaactccgattggttcagccggttttgccatg aaaaaagacctggtcgcaccggagaaagccgaccgatcaatagtgcttgcccttaaggaa cgcattatgaacgaccgaattattttattctgtactaactgcaagaaatggacttcacgc cggcaggtcaagaacgtccctgaagaaatcatctgcccggtctgcgagtccaggatgatt gcagccctcaaaccctgggaagaagaggaaattaaccttgtcaaaaaacaggcaaaaaaa gtcaaagtctctcccgaagaaaagaaacggatacagagagtttacagaaacgcaagcata gtacgctcgcaggggaaaaaggcggttattgcgcttgcgagcaggggagttgggcctgat acggcgtcaaaggttattgaaaagatgagggtggacgaagaagcgttttacagggatatt ctggttgcagagagaaattatgtgaagacgaagaagttttgggaatga

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