Methanosarcina sp. Kolksee: MSKOL_3214
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Entry
MSKOL_3214 CDS
T03821
Name
(GenBank) LSU ribosomal protein L40e
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MSKOL_3214
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MSKOL_3214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mek03011
]
MSKOL_3214
04121 Ubiquitin system [BR:
mek04121
]
MSKOL_3214
Ribosome [BR:
mek03011
]
Ribosomal proteins
Eukaryotes
Large subunit
MSKOL_3214
Archaea
MSKOL_3214
Ubiquitin system [BR:
mek04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
MSKOL_3214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L40e
Zn_Ribbon_1
DZR
DZR_2
zf-AtTam37
Zn_ribbon_RPAB4
Zn_ribbon_ZPR1
Cas12f1-like_TNB
Ribosomal_L37e
zf-ChsH2
Zn_ribbon_LapB
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AKB48991
UniProt:
A0A0E3LK67
LinkDB
All DBs
Position
complement(4167608..4167757)
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AA seq
49 aa
AA seq
DB search
MGRFPEAEERLLNKKICMRCNARNAIRATRCRKCGYSALRVKSKESKGA
NT seq
150 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgttttccagaagcagaagaaagattattaaataaaaaaatttgcatgcgatgc
aatgcaaggaatgcaataagggcaacccgctgcagaaaatgcggctacagtgctcttcgg
gtaaaatccaaggaatccaagggagcatga
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