KEGG   Methanosarcina sp. Kolksee: MSKOL_3214
Entry
MSKOL_3214        CDS       T03821                                 
Name
(GenBank) LSU ribosomal protein L40e
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
mek  Methanosarcina sp. Kolksee
Pathway
mek03010  Ribosome
Brite
KEGG Orthology (KO) [BR:mek00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    MSKOL_3214
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MSKOL_3214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:mek03011]
    MSKOL_3214
   04121 Ubiquitin system [BR:mek04121]
    MSKOL_3214
Ribosome [BR:mek03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    MSKOL_3214
  Archaea
    MSKOL_3214
Ubiquitin system [BR:mek04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   MSKOL_3214
SSDB
Motif
Pfam: Ribosomal_L40e Zn_Ribbon_1 DZR DZR_2 zf-AtTam37 Zn_ribbon_RPAB4 Zn_ribbon_ZPR1 Cas12f1-like_TNB Ribosomal_L37e zf-ChsH2 Zn_ribbon_LapB Zn_ribbon_3
Other DBs
NCBI-ProteinID: AKB48991
UniProt: A0A0E3LK67
LinkDB
Position
complement(4167608..4167757)
AA seq 49 aa
MGRFPEAEERLLNKKICMRCNARNAIRATRCRKCGYSALRVKSKESKGA
NT seq 150 nt   +upstreamnt  +downstreamnt
atgggtcgttttccagaagcagaagaaagattattaaataaaaaaatttgcatgcgatgc
aatgcaaggaatgcaataagggcaacccgctgcagaaaatgcggctacagtgctcttcgg
gtaaaatccaaggaatccaagggagcatga

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