Methanosarcina sp. Kolksee: MSKOL_3383
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Entry
MSKOL_3383 CDS
T03821
Name
(GenBank) Ribulose-1,5-bisphosphate carboxylase, Type III
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek00630
Glyoxylate and dicarboxylate metabolism
mek00710
Carbon fixation by Calvin cycle
mek01100
Metabolic pathways
mek01110
Biosynthesis of secondary metabolites
mek01120
Microbial metabolism in diverse environments
mek01200
Carbon metabolism
Module
mek_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSKOL_3383
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
MSKOL_3383
Enzymes [BR:
mek01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MSKOL_3383
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AKB49160
UniProt:
A0A0E3QIE2
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All DBs
Position
complement(4365080..4366366)
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AA seq
428 aa
AA seq
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MRRDYIDMDYSPKDTDLVCEFHIEPSAGVNFEEAATHMAGESSIDSWTEIATLSPELAAR
LKPHVFYVDEDAQTVRVAYSEELFELGSVPQVLSAVAGNIFSMKIVDNLRLQDIAFPKSM
LSEFKGPGFGLPGIKELTGVQDRPLIGTIVKPKVGLTSEKHAEVAYNSFAGGCDLVKDDE
NLTDQKFNRFEKRAELTLKLAEKAESETGERKMYLCNITAPTCKEMIRRMNILKDLGASY
AMIDIVPVGWTALQTLREEADDAGLALHAHRCMHSAYTRNPHHGISMLVVAKLCRLVGLD
QLHIGTVVGKMHGEKHEVLSLRDECVLDNVPADESQHVLAQDWGGLKPMFPVASGGLAPT
MIPDLYTIFGRDVIMQFGGGIHAHPMGTAAGATACRQALEAALEGVSLQEYAKNHRELEL
AIDKWLKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagagattatatagacatggactatagcccgaaggatactgatctggtatgtgag
ttccatatcgaaccgtcagcaggagtgaattttgaggaagctgcaacccatatggcaggg
gaaagctctatagattcctggactgaaatcgccacactcagtcccgaacttgcagccagg
ctaaaaccccatgttttttacgtagatgaggatgcacagactgtaagggtagcttactcg
gaagaactctttgaacttggttctgtcccgcaggtactcagtgcggttgcaggaaatatc
tttagtatgaaaatcgttgacaatctcagactgcaggatatagctttcccgaagtcaatg
ctctccgaattcaaaggtcctggattcgggttgccaggaatcaaggaacttacaggtgtg
caggacaggcctctcataggaactattgtcaagccgaaagttggattaacctctgaaaaa
catgctgaggtcgcttacaattcatttgcaggaggctgcgaccttgttaaagatgacgag
aaccttacggatcagaaatttaacagatttgaaaaaagagctgaacttactctgaagctt
gcagaaaaagcagaatctgagaccggagagcgtaaaatgtatctctgcaacattactgct
cctacctgtaaggaaatgatccgtcgcatgaacattcttaaagacctgggtgccagctat
gcgatgatcgacatcgtacctgtgggctggactgcacttcagaccttaagggaagaagca
gacgatgcagggcttgctctccatgcccaccgatgcatgcattcagcctataccaggaac
ccacaccatgggataagcatgcttgtcgttgccaagctctgcagactggtcgggcttgat
cagcttcacatcggtactgtagtagggaaaatgcacggagaaaaacacgaggttctatct
ctccgtgatgagtgtgtgttagacaatgtgcctgcggatgaaagccagcatgtacttgcc
caggactggggagggttgaagcctatgttcccggttgcttccggagggcttgcccctact
atgattcctgacctgtacactatcttcggaagggatgttattatgcaattcggtggcgga
attcacgcccatccaatgggtacggcagccggagccactgcttgcaggcaggcactcgaa
gcagcccttgagggagttagcctgcaggaatatgcgaaaaaccacagagaacttgaactt
gccatcgataagtggctgaagaaataa
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