Methanosarcina sp. Kolksee: MSKOL_3388
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Entry
MSKOL_3388 CDS
T03821
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSKOL_3388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mek03019
]
MSKOL_3388
03009 Ribosome biogenesis [BR:
mek03009
]
MSKOL_3388
04131 Membrane trafficking [BR:
mek04131
]
MSKOL_3388
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mek04147
]
MSKOL_3388
Messenger RNA biogenesis [BR:
mek03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSKOL_3388
Ribosome biogenesis [BR:
mek03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSKOL_3388
Membrane trafficking [BR:
mek04131
]
SNARE
SNARE associated proteins
Others
MSKOL_3388
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSKOL_3388
Exosome [BR:
mek04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSKOL_3388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
AAA_2
TIP49
AAA_14
AAA_22
AAA_33
AAA_28
nSTAND3
Sigma54_activat
ABC_tran
Vps4_C
AAA_7
AAA_17
AAA_3
IstB_IS21
Mg_chelatase
RNA_helicase
NPHP3_N
AAA_18
Zeta_toxin
ATP-synt_ab
TsaE
DUF815
AAA_24
PhoH
NB-ARC
Parvo_NS1
AAA_30
SLFN-g3_helicase
AAA_11
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
AKB49165
UniProt:
A0A0E3QHB6
LinkDB
All DBs
Position
complement(4372980..4375244)
Genome browser
AA seq
754 aa
AA seq
DB search
MIEEINLRVAEAYHKDVGRGIARIDTRLMQQMELVSGDIIEISGKAKTYAIVWPNVEREQ
ENRIRIDGNLRSNAKVGIDDRVTIQKVQAKHAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTDIVIKEKSVEEARVPEGISYEDIGG
LKREIQLVREMIELPLRHPELFQKLGIEPPKGVLLHGPPGTGKTLIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFEEAEKEAPSIIFIDEIDSIAPKRGEVTGELERRVVAQL
LSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRKQILLIHTRGM
PIQDVSLSEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEEEIPQEILDKLVVTR
DDFKEALKNIEPSAMREVYVEVPHVGWDDIGGLENAKQELIEAVEWPLKYPELFSTINIK
PPRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAVRETFRKAKQA
APTVVFFDEIDSIAPQRSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDP
ALLRPGRFDRLIYIKPPDNTSREKIFEIHTQGKPLAEDVNLAELADMTEGYVGADIQGIC
REAAMLALREIVTPGAGRKDLAKRAGEVRISKKHFERAIRRVKPTTSRENLVAYERSAEL
FAKYATEFEEEAPESEEQEKEIEHENVPGFFQAQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaaattaatttgagagttgctgaagcttatcataaggatgtgggtagggga
attgcaagaattgacacccgcttgatgcagcagatggaacttgtaagcggggatataatt
gagatctcagggaaagctaagacctacgcaattgtctggccaaatgtagaacgtgaacag
gaaaatcggatccggattgacggtaacctccgcagtaatgccaaagttgggattgatgat
agggttacaatccagaaagtccaggcaaaacacgcccagagagttacccttgctccttct
cagcctgtaagacttgttggaggggctcactacatccttagaattatcgagggaagacct
ttgaacaaaggtcagcagatcagggtggaaactgtaaataaccctttgactttcgtagtt
gcatctacaagacctgcaggacctgttgttgttactaaagacactgatatagtgattaag
gagaaatcagttgaggaggcccgggttccagaaggtatttcttatgaggatatcggtggg
cttaaacgggaaattcaacttgtcagagaaatgattgagttgccgttgagacatcctgaa
ctcttccagaaacttggaattgagcccccaaaaggagtgttgcttcacgggcctccaggc
acgggtaaaacactgatcgcaaaggcagtcgcaagtgaaaccgatgcaaatttcattact
attagcggccctgaaatcgtttccaagtattatggagaaagcgagcagaagcttcgcgag
attttcgaggaagccgaaaaggaagcgccttctattatcttcatagatgagattgattcc
atcgctcccaagcgcggcgaagtaacaggagaattggaacgcagggtagttgcccagttg
ctctcccttatggacggtctaaagtccaggggcgaggtagttgtaattgctgccacaaac
cgcccgaactcaatagatgaagctctccgccgtggtggaagatttgatcgggaaatagaa
atcggaattcccgatcggaacggcaggaagcagattcttctcattcataccagaggtatg
cctattcaggatgtaagccttagtgaaattgcagatgtaactcatgggtttgtaggcgct
gatctgtcttccctctgtaaagaagcagcaatgcatgctctcagaaggataactcccgaa
atcgatatcgaagaggaagaaattccacaggaaattcttgataaactcgtagtcaccaga
gatgatttcaaggaagccctgaagaatatcgagccgtctgcaatgagagaagtttatgtt
gaggttccgcatgtaggatgggatgatatcggaggacttgaaaatgcaaagcaggaactt
attgaggctgttgagtggcccctgaagtatcctgaactcttcagcactatcaatataaaa
cctcccagaggagtgttactgtttgggcctcctggtacaggtaaaaccttgcttgcaaag
gccgttgcaagtgaaagcgaagccaatttcatcagcattaaaggtccagaacttctcagc
aagtatgtaggagaatccgagcgtgcggttagggaaaccttcaggaaagccaaacaggct
gcaccgacggttgtcttctttgatgaaatcgattcaatcgcaccccaaagaagttctgtt
tcagatacgcacgtgtccgaaagagttgttagccagatcctcaccgaactggatggagtc
gaggaactcaaggatgtaattattgttgcggccacaaatcggcctgatatggtagatcct
gcgctcctcaggcctggccgctttgataggctcatctatattaagccacctgataacaca
agcagggaaaagatctttgagatccatacgcagggaaaacctcttgcagaagatgtaaat
ctcgccgagcttgctgatatgaccgaagggtacgtaggtgcagacatccagggtatttgc
agggaggctgcgatgctggccctgagagaaatcgtcactccaggagctggcagaaaggac
ctcgcgaaacgggcaggagaagtcaggatttcaaagaagcactttgaacgcgcaatccgc
cgtgtgaagcctacaacatccagggaaaacctcgtggcttatgaacggagtgctgaactc
tttgctaaatacgcaactgaatttgaagaagaagctcccgagtctgaagaacaggaaaaa
gaaatagaacacgaaaatgtcccgggtttctttcaggctcagtaa
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