Methanosarcina sp. Kolksee: MSKOL_3408
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Entry
MSKOL_3408 CDS
T03821
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSKOL_3408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mek03019
]
MSKOL_3408
03012 Translation factors [BR:
mek03012
]
MSKOL_3408
Messenger RNA biogenesis [BR:
mek03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSKOL_3408
Translation factors [BR:
mek03012
]
Eukaryotic type
Release factors
MSKOL_3408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_LysW
Vps36-NZF-N
Zn_ribbon_DUF2089
PARP_regulatory
HypA
Zn_ribbon_3
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AKB49185
UniProt:
A0A0E3QIG2
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Position
4397768..4399015
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AA seq
415 aa
AA seq
DB search
MAEQSAHEKYEFKKKLESLRDKKGRSTELISLYIPADKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLNKVPENGIVYFTGAVDIGANKTNMESEVIIPPEPITVYKY
HCDSSFFLEPLEEMLKDKGTFGLLVLDRREATVGLLVGKRIQAFRNLTSTVPGKQRKGGQ
SSHRFQQLRLIAIHDFYKRIGDAADDIFLAVEPKDLKGILIGGPSPTKEEFYAGEFLHHE
LMRKILGLFDTAYTDESGLSELVNAAADKLQDLELMGQKNAVRAFFKELISDSGKVAYGE
TQVRANLEINSVEMLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGESAPTAGNCPNCGA
SLEVTDVTDIVDELSALADKSNAKVIFVSTDFDEGSQLMNAFGGIAAILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaatctgcacacgaaaagtacgaatttaaaaagaagcttgaaagcctgagg
gacaaaaaaggaagaagcactgaattaatttctctttatatccctgctgacaagcagatt
tttgatgttacaaaccagttgaaagacgaacacggacaggcggcaaatattaagtccaaa
cttaccaggactaatgtacagggagccattgaatctcttctttcaaggcttagatatctt
aacaaggttcctgaaaacgggatcgtttatttcacaggagccgtggatatcggggctaac
aagacaaacatggagagcgaagtaattatccccccggaacccattactgtctataaatat
cattgcgactcctctttctttcttgaacccttagaggaaatgctcaaggataaaggcacc
tttgggcttctggtgcttgaccgaagagaagctacagtagggcttcttgtcggaaaaagg
attcaggctttccgcaatcttacctcaacagttccgggaaaacagaggaaaggtggtcag
agttctcatcgtttccagcagctcaggttaattgctatccatgatttctataagaggata
ggagacgccgcagatgatattttcctcgccgttgagcctaaagatctcaaaggtatcctg
ataggaggtccttctcctacaaaggaagagttctacgccggggaatttctgcaccacgaa
cttatgagaaagatccttgggctctttgatacggcttacactgacgaatcagggctctcg
gaacttgtgaatgctgccgcagataagctccaggatcttgagctcatgggacagaagaac
gctgtcagggccttcttcaaagaacttatttccgactcaggcaaagtagcctatggggaa
actcaggtacgggcaaaccttgaaatcaattctgtggaaatgctcctgctttccgaagat
ctgcgggctgaaagggtaaccacgaagtgcagtgtttgcggatatgaaaataagtggaca
cggcgctggaaacccggagaatctgcacctacagccgggaactgcccgaactgtggagct
tcccttgaagttacggatgttaccgacatcgttgacgagctctcagcccttgctgacaaa
agcaatgcaaaagttattttcgtgtctacagactttgacgaaggctcgcaacttatgaat
gctttcggaggcattgctgcaattctcaggtacagtactggagtctga
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