Metabacillus elymi: HUW50_02230
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Entry
HUW50_02230 CDS
T06752
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
meku
Metabacillus elymi
Pathway
meku03030
DNA replication
meku03430
Mismatch repair
meku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUW50_02230 (dnaE)
03430 Mismatch repair
HUW50_02230 (dnaE)
03440 Homologous recombination
HUW50_02230 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meku03032
]
HUW50_02230 (dnaE)
03400 DNA repair and recombination proteins [BR:
meku03400
]
HUW50_02230 (dnaE)
Enzymes [BR:
meku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUW50_02230 (dnaE)
DNA replication proteins [BR:
meku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUW50_02230 (dnaE)
DNA repair and recombination proteins [BR:
meku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUW50_02230 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DNA_pol_IIIA_C
DUF655
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QNF26478
LinkDB
All DBs
Position
complement(450150..453518)
Genome browser
AA seq
1122 aa
AA seq
DB search
MPFVHLQVKSAYSLLTSAARLDRLVNKAKTLKFKALALTDDQVMYGTVAFYKLCKQHGIK
PIIGLTINILDEQGEGESTSLILLAENNNGYRNLLKISSALQTKTPEGLPERWLKSYSQG
LIAISPGMDGIIEKNLLEGNRVKAKELTKKYETIFGQKSFYLGLQNHLLEQEKHLLTELV
SLSEETKVPVVATNNVAYLEQDDYMAYKCLSAIKNGDKLSDEHIDLHTPNEYYLKSQEDM
VSLFDQYPDALENTLLIAERCQVDLELGVTHLPKFPTPNSESANEYLEQLCMEGLKDRFE
EPKKSYLDRLTYELSVIKKMNFSDYFLIVWDFMKYAHENSILTGPGRGSAAGSLVSYVLK
ITDVDPIKHRLLFERFLNPERITMPDIDIDFPDTRRDEVIHYVANKYGKIHVAQIITFGT
LAAKAAIRDIGRVMGASPKETELLSKQIPTRPGITLTKAITESHVLQKMIRENELYKKII
DTALKIEGLPRHASTHAAGVVLSDQPLTNIVPIQNGQHEVYLTQFSMDYLEDLGLLKMDF
LGLRNLSLIENITKLIQREEGYSVNLPKISYQDEKTFSLLSSGDTTGVFQLESEGMRSVL
KRLKPTSLEDIVAVNALYRPGPMENIPLYIERKHQKSSVHYLHPALEPILHSTYGVIVYQ
EQIIEIASTIAGFTLGEADLLRRAVGKKKKDVLDKEREHFVKGCKSNGYNEQVANNVYDL
IVKFADYGFNRSHAVAYSMIAYQLAYLKANYPLYFMTALLTSASGNDDKVSQYIREAKQK
GVTILPPSVNYSAYPFLVENGNIRYSLTAIKNVGIAAIKEIFHARKKKPFTDLFDFCIRV
SMKIINRRIMEQLIFSGAMDDFGVERATLLASLDVAIEHAELLTPTDENQIDFFEEEAFA
LKPKYIEVEPFKIEEKLKFEKETLGFYFSSHPVELYREKFQSVNASNISDMGLKIDKKAM
IGAMIVSIRTIRTKKGDVMAFLVIADETGDIDAVMFPQIYTKFSEKISIGDTFLLDGKVE
RRQDKVQFIIQKVVSPEELSSLDDKSKLFIKIERQSMEPKRLFEVKNYLKEFSGDTPVFL
YYESEKRTVQLPSEFFISPTEECMDALIKLLGKENVVLRNHQ
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
ttgcctttcgtacatctacaagtaaaaagtgcatacagcctgttaacgagtgctgcaagg
ttggacaggcttgtaaataaagcgaaaacacttaaatttaaagcattggcattaaccgat
gatcaagtcatgtatggtactgttgcgttttataagctatgcaaacaacatggtattaag
ccaattatcggtttaacaataaacattctagatgaacaaggagagggagagtctacctca
cttattttattagcagaaaataataatggatatcgaaatttattaaagattagtagtgca
ctgcagacgaaaactcctgaaggattacctgaaaggtggcttaagagctatagtcagggt
ctaatcgccattagcccaggaatggacggaatcattgagaaaaatttattagaaggaaat
cgtgtaaaagcaaaagagctaacgaaaaaatatgaaactatatttggtcaaaaatctttt
tatctggggctccaaaatcacttgttagagcaggaaaagcatttattaaccgaactagtc
tctttgagcgaagaaacgaaggtacccgttgttgcaactaataatgttgcctacctagag
caagacgactatatggcttataaatgtttatcagcaataaaaaacggtgataagctttca
gatgagcacattgatttacacacaccgaatgaatattatttaaaatcgcaggaggacatg
gtctcactatttgatcaatatcctgatgcgttagaaaatactttgttaatagcggagcgg
tgtcaagttgatcttgaacttggagttacacatttaccaaaattcccaacaccaaacagt
gaaagtgcgaatgaatatttagaacaactttgtatggaaggattaaaagaccgttttgag
gaacctaagaaaagctatctagatagacttacatatgaactaagtgtcataaagaagatg
aattttagcgattattttttaattgtttgggattttatgaaatatgcacatgaaaatagc
attcttacgggtccggggcgtggatcggcagcaggatcactagtttcttatgtgttaaaa
attaccgatgttgatccgattaaacaccgcctcctttttgaacgttttttaaatccagaa
cgaattacaatgcctgatattgatattgattttccagatacaagacgagatgaagtcatt
cattatgttgcgaacaaatatgggaaaattcatgtagcgcaaattatcacgtttggaact
ttggctgcaaaagctgcaatccgtgatattggtagagtaatgggagcttcaccgaaggaa
accgaattactttctaaacaaattccaacacgtcctggtattactcttacaaaagccata
acagaatcgcatgttttacaaaaaatgattcgtgaaaatgagttatataaaaagataatc
gatacagcattaaaaatagaagggcttccaagacacgcgtcaacacatgcagcaggtgtt
gttctaagtgaccaacctttaactaatattgtcccgattcaaaatgggcagcatgaagta
tatttaactcagttttcaatggattatttagaggatctaggcttattgaaaatggacttt
ttaggtctaaggaatttatcattgatagaaaatataacaaaattaatccagcgtgaagaa
ggatattctgttaacttaccgaaaatatcttatcaggacgaaaaaacattttctctactt
tcaagtggggatacaacaggtgtatttcagttagagtctgaaggtatgagaagtgtttta
aaacgacttaaaccaacaagccttgaagatatcgttgcagttaatgcattgtatcgtccg
ggcccaatggaaaatatccctctctatattgaaagaaaacatcagaaaagctctgtgcat
tacctccaccctgcgcttgagcccatcttacattcgacctatggagtcattgtttatcaa
gaacaaatcattgaaattgcctcgactattgctggatttactttaggtgaagctgattta
ttaagaagagctgtaggtaagaagaagaaagatgtacttgataaagagcgggagcatttc
gtgaagggttgtaagtctaatggttataatgaacaagttgcaaataatgtttatgattta
attgtgaaattcgccgattatggctttaatcgaagtcatgcagtggcatacagcatgatt
gcttatcaattagcatatcttaaggcgaattacccactttattttatgacggctctattg
acaagtgcgagtggaaatgacgataaggtttcacagtatatacgtgaagcaaaacagaag
ggagttacaattttacctccttctgtaaattatagtgcatacccattcttagttgagaat
ggtaatattcgatatagcttaactgcaataaaaaatgttgggattgcagcgataaaagaa
atattccatgcccgcaaaaagaaaccatttacagacttatttgatttttgcataagggta
tcaatgaagattattaatcgtcggataatggaacagttaattttttcaggagctatggat
gattttggagtggagagagcaaccttgctagccagcttagatgttgctattgagcatgca
gaattgcttacaccgactgatgagaatcagattgatttttttgaggaagaagcctttgca
ctcaagcctaaatacatcgaggtagaaccattcaaaattgaagaaaagttgaaatttgaa
aaagaaacacttggcttctacttttcttcccatccagtcgaactgtatcgggaaaaattt
caatcagttaatgcaagtaatatatcagatatgggtttgaaaatagataaaaaagccatg
ataggtgcaatgatcgtgagtattcgaacaatccgcacgaaaaaaggtgacgtaatggca
tttttagtcattgctgatgagacaggtgatattgatgctgttatgtttccacaaatttat
actaaatttagtgaaaagatatcaattggtgacaccttccttttagatgggaaagtagag
agacgtcaagataaggtccaatttattatccaaaaagtcgtatcaccagaagaactatct
agtcttgatgacaaatcaaagctttttataaaaattgaaagacaatctatggaaccaaaa
agattatttgaagtgaagaattaccttaaagagttcagtggggatactccagtatttctc
tattatgaatctgaaaaaagaactgttcaacttccatcagaattctttatttctccaact
gaagaatgtatggatgcattaattaaattacttggtaaagaaaatgttgttttaaggaac
catcaataa
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