Metabacillus elymi: HUW50_02585
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Entry
HUW50_02585 CDS
T06752
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
meku
Metabacillus elymi
Brite
KEGG Orthology (KO) [BR:
meku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meku03016
]
HUW50_02585 (thpR)
Enzymes [BR:
meku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HUW50_02585 (thpR)
Transfer RNA biogenesis [BR:
meku03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HUW50_02585 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QNF26544
UniProt:
A0A7G7FNR0
LinkDB
All DBs
Position
complement(527864..528439)
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AA seq
191 aa
AA seq
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MKHQTHFFIAVPIEIDLRKAIHNWLANNKGNLPFQSWVHQEDYHITLAFLGQIDADDQLK
RLSKLVKDKIVNLPPFSLSVKGLGVFGKKDTPRIFWAGIEDSSSLIYLQKQVFHACQEIG
FNLDSKPFRPHITLARRWKSDKPFVTPELFLEAIHNEHQTFIVKEIHLYQTHLDRFPKYE
AIDVFDLKGDK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatcaaactcatttttttattgcagttccaatagaaatcgatcttagaaaagca
atacataactggctagctaataataagggcaaccttccattccaatcttgggttcatcaa
gaagattatcatattactttagcttttttgggtcagattgatgcagatgatcagttaaaa
agattatcgaaacttgtgaaagacaaaatagtcaatttaccaccattcagcctttcagta
aaggggcttggtgttttcggtaaaaaagatacaccaagaatattttgggctggaattgaa
gactcttcatcccttatttatttgcaaaaacaagtttttcatgcttgtcaagaaattggt
tttaatcttgattcaaagccgttccgtcctcatatcacacttgcaagacgttggaagtca
gacaaaccttttgttacaccggaactgtttctcgaagcaattcataatgagcaccaaacc
tttatagtcaaggagattcatttgtatcagacccatcttgatcgatttccaaagtatgaa
gcaattgatgtttttgatttaaaaggtgataaatga
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