Metabacillus elymi: HUW50_09400
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Entry
HUW50_09400 CDS
T06752
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
meku
Metabacillus elymi
Pathway
meku03030
DNA replication
meku03430
Mismatch repair
meku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUW50_09400 (holB)
03430 Mismatch repair
HUW50_09400 (holB)
03440 Homologous recombination
HUW50_09400 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meku03032
]
HUW50_09400 (holB)
03400 DNA repair and recombination proteins [BR:
meku03400
]
HUW50_09400 (holB)
Enzymes [BR:
meku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUW50_09400 (holB)
DNA replication proteins [BR:
meku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUW50_09400 (holB)
DNA repair and recombination proteins [BR:
meku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUW50_09400 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
DUF5608
Motif
Other DBs
NCBI-ProteinID:
QNF27708
LinkDB
All DBs
Position
2000083..2001075
Genome browser
AA seq
330 aa
AA seq
DB search
MAKNWQDLASYQPRVIKLLANSIQKQRLAHAYLFEGKRGTGKKDIGILLAKSFFCENLQD
YKPCESCKNCKRIQSGNHPDVHIVEPDGLSIKKGQIQALQEEFSKSGVESNKKLYMIIHA
DKMTVNAANSLLKFLEEPNANTIAILMTEQYHKILNTILSRCQLLSFQPLQPKSIEEALI
ESSITKHLAALVSQLTNDTEAAIEIAQDDWFAQGRLKVIKLYEIVVNRKGQAPIYVHTDW
MSHFNDKDKQETGLDLLLYIYKDVLSVQLGNEEQVIYQDLIQQLKQHALQMTQRSVTEKI
TSILEAKKRLHANVNPQLLMEKLVLTLQEG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaattggcaagatttagcgtcatatcaaccgcgtgttattaagctactagcg
aacagtattcaaaagcaacggttagcgcatgcctatttatttgaggggaaaaggggaaca
ggaaaaaaggacataggaatccttttagcaaaaagtttcttttgtgaaaatctccaagac
tataagccgtgtgagagttgtaaaaattgtaagaggatacaatctggtaaccatccagat
gttcatattgttgagcctgatggtctgtctataaagaaaggacagattcaagcgttacaa
gaggaattttcaaaatcaggtgttgaatctaataaaaagctctatatgatcattcacgct
gataaaatgacggtaaatgctgcaaacagtttactgaagtttttagaggaaccaaatgca
aatacaattgcaattctaatgactgagcagtatcataaaatcttaaatacgatcctatct
cgttgccagctattatcctttcaacctttacaaccaaaatctatcgaagaagcacttatt
gaatcaagtattactaagcatttagcagctctcgtttcacagctaacgaatgatacggaa
gcagcaattgagattgcacaagatgattggtttgcgcaaggaagattgaaagtgataaaa
ttatatgaaatagtcgttaatcgaaaaggacaggcaccaatctatgttcatacagattgg
atgagccactttaatgataaagataagcaagaaacagggttagacttgttattatatata
tataaagatgttttatcggtccaattaggaaacgaggaacaagtcatttatcaagacttg
attcagcaattaaagcagcatgcccttcaaatgacacaaagaagtgtgactgagaagatt
acttctattttagaggctaaaaaaaggcttcatgccaatgtaaatccacaattattgatg
gaaaaattggttttaacattgcaggagggataa
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