Metabacillus elymi: HUW50_10520
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Entry
HUW50_10520 CDS
T06752
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
meku
Metabacillus elymi
Pathway
meku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUW50_10520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meku03019
]
HUW50_10520
03009 Ribosome biogenesis [BR:
meku03009
]
HUW50_10520
Enzymes [BR:
meku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUW50_10520
Messenger RNA biogenesis [BR:
meku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUW50_10520
Ribosome biogenesis [BR:
meku03009
]
Prokaryotic type
rRNA helicases
HUW50_10520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QNF27890
UniProt:
A0A7G7FSK6
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All DBs
Position
2205453..2206964
Genome browser
AA seq
503 aa
AA seq
DB search
MTLTFQELGLSSALMQSISKMGFEEPSPIQAQTIPLGLQNKDVIGQAQTGTGKTAAFGVP
LIEKIDMKNESIQAVVVAPTRELAIQVSEELYKIGYHKRSRVLPIYGGQDINRQIRSLKK
NPHIIVGTPGRLLDHINRKTIRLNAVHTIVLDEADEMLNMGFIEDIESILSNVPSERQTL
LFSATMPDPIRRIAEKFMKDPELVKVKAKEMTVPNITQYYLETHERKKFDVLTRLLDIQS
PELAIVFGRTKRRVDELSEALTLRGYTAEGIHGDLTQAKRMSTLRKFKEGTIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFVTPREMDIVKNIERTT
KSKMERMKPPTVDEAIESQQQMTVEKIRSIVESDNLAFYKRTAEELLEEFDAQVVVAAAI
KYMTKEPNAVEVKLTDEAPAFSRSKNKGRSSSSNNRRRGDYNRSGSGGSGGGQKKNNNRS
YGDRDRNKAGNRDNSKRRYSNSK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacattaacgtttcaagaattaggtttaagttcggcactcatgcaatcaataagcaaa
atgggatttgaagagccatctccaatccaagcacaaacaattccgttaggtttacagaat
aaagatgtgattggacaggcacaaacaggtactggtaaaactgctgctttcggtgttcca
cttattgaaaaaattgacatgaaaaatgaaagcattcaagctgttgtagttgcaccgacg
cgtgaacttgcaatccaagtatcggaagaactttataaaattggttaccacaaacgctct
cgtgtgcttccaatttacggtggtcaggatatcaacagacaaattcgttctttgaaaaag
aatccacatattattgtgggaacacctggacgtttattggatcatattaatcgtaaaaca
atccgtttaaatgctgtccatacaatcgtattggatgaagctgatgaaatgctgaacatg
ggatttattgaagatattgaatcaattctttcaaatgtcccatcagaacgccaaacgctt
ctgttctctgcaacaatgcctgatccaattcgtcgtattgctgagaaattcatgaaagat
cctgaattagttaaagttaaggcgaaagaaatgactgtgcctaacattactcagtattac
ttagaaacacatgaaagaaagaaattcgacgtattaacaagattacttgatattcaatct
ccagaacttgcaattgttttcggtcgtacaaagcgtcgtgtagatgagttgtctgaggcg
ttaacattaagaggatatactgcagaaggaattcatggtgatctaactcaagcaaagcgt
atgtcgactttacgcaaatttaaagaaggtacaattgaagttttagttgctactgatgtt
gcagctcgtggtttagacatttctggagtaactcacgtttacaactttgatgttcctcaa
gatccagaaagctatgttcaccgtattgggcgaactggacgtgctggaaaaacaggtatg
gcaatgacatttgttacaccaagggaaatggatatcgttaaaaatatcgagcgtacaaca
aaaagtaaaatggagcgcatgaagccaccaacagttgatgaggcaattgaaagtcaacaa
caaatgactgttgaaaagatacgctcaattgttgaaagtgataaccttgcattttacaaa
cgtactgctgaagagcttcttgaagaattcgatgcacaagtagtagttgcggctgctatt
aagtacatgacaaaagagccgaatgctgtagaagtaaaactaacagatgaagctcctgca
ttctcaagatctaaaaataaaggtcgttcttcttcttctaacaacagaagaagaggagac
tataaccgcagtggtagtggtggtagcggtggcggtcaaaagaaaaacaataaccgttca
tacggtgaccgtgacagaaataaagcgggtaacagagataatagcaaacgacgttactca
aattctaaataa
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