Metabacillus elymi: HUW50_20165
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Entry
HUW50_20165 CDS
T06752
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
meku
Metabacillus elymi
Pathway
meku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUW50_20165 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meku03019
]
HUW50_20165 (rny)
Messenger RNA biogenesis [BR:
meku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUW50_20165 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF6132
DUF5518
DUF2844
DUF3169
Motif
Other DBs
NCBI-ProteinID:
QNF29601
LinkDB
All DBs
Position
4383764..4385329
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AA seq
521 aa
AA seq
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MMDIVSIIISILLGLIVGAVVGYFVRKSIAEAKIAGANHAAEQILEDAKRDAEATKKEAL
LEAKDEIHKLRTDAEQEVRERRNELQKQENRLLQKEENLDRKDESLDKREVMLEKKEDSL
NERQQHIEEMESKVDEMVRKQQTELERISSLTRDEAKSIILEKVEKELTHDTAIMIKDSE
SRAKEEADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYI
REIGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSTEVSFLAGLMAAELGEDVL
LAKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVI
VAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDSI
DDLQAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatagtatcaataatcatctccattttgcttggcctaatcgtcggtgcagtt
gttggctattttgttcgtaaatccattgccgaagcgaaaattgctggtgcaaatcatgct
gcagagcagattcttgaagatgcaaagcgtgatgcagaagcaacgaaaaaagaagcactt
cttgaagcaaaggacgaaattcacaagttgcgaacagatgcagagcaggaagttcgtgag
agacgaaatgagcttcagaaacaagaaaatcgcttattacaaaaggaagagaatcttgac
cgtaaggacgagtctttagataaacgtgaagttatgctagagaaaaaagaagattctctg
aatgaaagacaacagcatattgaagagatggaaagcaaagtggacgagatggtgcgtaaa
cagcaaacagagcttgagcgcatatctagccttacacgagatgaagcaaagtcgatcatt
cttgaaaaggttgaaaaagaacttacacatgataccgctataatgattaaagatagcgaa
agtcgtgccaaggaagaagctgacaagaaggcaaaagaaatcctgtcgcttgctattcaa
cgatgtgcagcagatcatgtagccgaaactacagtatctgttgtcaatcttccaaatgat
gaaatgaagggtcgtattattggacgtgagggacgtaatatccgtactttagaaacatta
acgggtatagaccttatcattgacgatacgcctgaagcagtaattttatcagggtttgat
ccaatccgtagggaaactgcaagaatagcgttagataagcttgttcaggacggtcgtatt
caccctgcacgtatcgaagagatggttgagaagtctcgacgtgaagttgatgaatacatt
cgagaaatcggagaacaaacgacatttgaggttggtgtacatggacttcatcctgatcta
ataaaaattcttggtcgtttgaaattcagaacaagttatggtcaaaacgtgttaaagcac
tctactgaggtatcattcttagcaggcctaatggctgccgaacttggtgaagatgtgtta
ttagctaaacgagcagggctcctgcatgatattggtaaagcaattgatcatgaggtggaa
ggaagtcacgttgaaattggtgttgagcttgcaacaaagtataaagagcatcctgttgtg
ataaatagtattgcttcacaccatggtgacacagagccaacttcaatcattgctgttatt
gttgcagcagcagatgcattatcagcggcaagacctggtgcacgtagtgaaacgcttgaa
aattacattcgtcgcctagagaagctcgaggaaatctctgaatcatatgaaggtgttgaa
aagtcgtttgcgatccaagcaggtcgagaagtacgtattatggttaagcctgatagtatt
gacgatctacaagctcatcgcttggcaagagacatcagaaaaagaattgaagaagaactc
gactatcctggtcacattaaagtaactgttatccgtgaaacaagagcagttgaatatgca
aaataa
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