Metabacillus elymi: HUW50_24715
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Entry
HUW50_24715 CDS
T06752
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
meku
Metabacillus elymi
Brite
KEGG Orthology (KO) [BR:
meku00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HUW50_24715
Enzymes [BR:
meku01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
HUW50_24715
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FIMAH
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
QNF30390
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All DBs
Position
complement(5354243..5356810)
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AA seq
855 aa
AA seq
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MNVRKKSLTKKVLAVSLAVPLLMTGYQGNAFATNSQGGHNLVQGNGIQLEYLDRGLVAAS
TSEGIFISWRLLANEVTGYSDSGLTGVNFNVYRDGEKIAMVEDSTNFLDVDGNDSSTYYV
AAVDNGKEIDQSSTTTPWDHTYYDLKLKKPSDGVTPSGEVYSYTANDMSVGDVDGDGKYE
FFVKWDPTNSKDVSQKGYTGKTYIDCYTFDGTLLYRIDLGVNIRSGAHYTQFLVYDFDGD
GKSELMFKTAPGTKMIKFDKNGDISSEKFITMPKEDKLDGYSHQDDYRMSSEDYYDHVVD
MFMDWHKHEEVVNGNWPETLEESFGIEKKYKYPLSQDDAESLADYFIDEYAPSRSSRNNL
RDFEGFIVKGPEYLTVFNGETGDELETIRYKYGREDDGLMWGDYAMSRIEPGNRVDRFLA
GVAYLDGEKPYAVFSRGYYTRATMVTYSWDGEHIKENWAVDSGWTPMSNPFNDGPHGRLG
TDKEFGSLTTQGAHSLSTADVDNDGKQEIIYGSSTIDHDGTLLYSSSDVMPPESATPGAT
AGLGHGDALHVADINPDRSGLEIFMVHEGGAYAPCGYALRDANTGKVIYGGYTGKDTGRG
MIGDVDPEHKGLETWAVGLWSADGEKINNSVPGTNMNIKWSADMTTQIVNGSIEQTPTIQ
DWTKGTILTATDTRTNNYTKGNPSLVADIFGDWREELLVRTADSNSIRIYLSSDVTDRKL
YSLMHDPQYRTGIAWQNVGYNQPSYTSYYFGSDTDWGNVPVPTYWTPGVFNVVQDLLATY
SKNGELNSPLNKKLEKSLKQAEHHAEKGSNKKSISFMEKFMNQINQNNKKTTISDKAKVN
LTNHAEQIIKMLETK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgaggaaaaaatctctaacaaaaaaagtattagccgtatctcttgctgttcca
cttcttatgacaggctatcaaggtaatgctttcgctactaattcccaaggaggacataat
ttagtccaaggcaacgggatccaactagaatatcttgacagagggttagttgcagctagc
acttctgaagggatatttattagctggagacttttagctaatgaagtgactggttattct
gattcaggattgacaggagtaaacttcaacgtgtaccgtgatggtgaaaaaattgctatg
gtagaagatagtacaaactttttagatgtagatggtaatgattcttcaacgtactatgtt
gctgcagttgataatggaaaggaaatcgatcagagctcgacaaccacaccctgggaccat
acatattatgatttgaaattaaagaagccgtcagatggtgtaacaccaagtggtgaagta
tattcttacacagcaaatgacatgagtgtcggggatgttgacggtgatggtaaatacgaa
ttttttgttaaatgggatccaacaaactcaaaagatgtatcacagaaaggctatacagga
aaaacttatattgattgttatacatttgatggcacactgttatatcgaattgatcttgga
gtaaacattcgatcaggagctcattatacacaatttttagtttatgattttgatggagat
ggaaaatcagaattaatgtttaaaacagctccaggaacaaaaatgataaagttcgacaag
aatggcgatatctcttcagagaagtttataacaatgcctaaagaagataagctagatgga
tatagtcaccaagatgactaccgtatgagcagtgaagattattatgatcatgttgtcgac
atgtttatggattggcataagcatgaagaagttgtaaacggaaattggccagaaacactt
gaagaaagttttggaatagaaaagaagtataaatatcctctatctcaggatgatgctgaa
agtttagctgattactttattgatgaatatgctccaagtcgaagtagcagaaataattta
agagattttgaaggttttattgttaaaggtcctgaatatttaaccgtatttaatggtgaa
acaggtgatgaactagaaaccattcgatataaatatgggcgagaagatgatggacttatg
tggggagattatgcaatgtctagaatcgagcccggtaaccgagttgatcgatttctggct
ggggtagcctatcttgatggggaaaaaccttatgcagttttctcacgtggctattatact
agagctaccatggttacgtatagctgggatggcgagcacataaaagagaattgggcggtt
gacagtggctggactccaatgagcaatccgtttaatgatggtccacatggtagattagga
acagataaggaatttggttcacttacaacccaaggtgcacattcattaagtacagcagat
gttgataatgatggaaagcaagaaatcatttatgggtcttcaacaatcgatcatgatgga
accttattgtatagctcaagtgatgtgatgccacctgagagtgcgacccctggagcaact
gcaggtttaggccatggtgatgcattgcatgttgcagatatcaatcctgatcgatctggt
ttagaaattttcatggtacacgaaggtggagcatacgcaccatgtggttatgcacttcgc
gatgccaatacaggaaaagtgatttatggtggatacactggtaaagatacaggaagagga
atgataggggacgtagatcctgagcacaaaggattggaaacatgggctgtcggactttgg
tcagcagatggtgagaaaattaacaattctgtaccaggaacaaatatgaatattaagtgg
tcagctgatatgactacgcaaattgtaaatggttcaatagaacaaactccaacgatacaa
gattggacaaaaggaacgatattaacggctactgacactagaacgaataattacacaaaa
ggaaatccatctttagttgcagatatttttggtgattggagagaagaacttcttgtacga
acagctgatagtaattcgattcgaatatacctaagttcagatgtgacagatcggaaatta
tattcactaatgcatgatccacagtatagaactggtattgcttggcaaaacgttggatat
aaccaaccgtcttatacaagttattattttggatctgatacggattggggaaatgtacct
gttccaacgtattggacaccaggtgtattcaatgtagtacaagacttattggccacatat
tcgaaaaatggtgaactaaatagtccgcttaataaaaagttagaaaaatctttaaaacaa
gctgagcatcatgctgaaaaaggctctaataaaaaatccatatcatttatggaaaagttc
atgaatcagataaaccagaataacaagaaaacgacaatttctgataaagcaaaagtaaac
ttaacaaatcatgctgaacaaataattaagatgttggaaacaaaataa
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