Metabacillus elymi: HUW50_26480
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Entry
HUW50_26480 CDS
T06752
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
meku
Metabacillus elymi
Pathway
meku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUW50_26480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meku03019
]
HUW50_26480
03400 DNA repair and recombination proteins [BR:
meku03400
]
HUW50_26480
Enzymes [BR:
meku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUW50_26480
Messenger RNA biogenesis [BR:
meku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUW50_26480
DNA repair and recombination proteins [BR:
meku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HUW50_26480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SNF2-rel_dom
Rhodanese
CoV_NSP4_C
Motif
Other DBs
NCBI-ProteinID:
QNF30707
UniProt:
A0ABX6SAS9
LinkDB
All DBs
Position
complement(5703519..5705018)
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AA seq
499 aa
AA seq
DB search
MNQQLGIVLKSYFHLEHFRTGQKEIIEAVLNGKDVVAMLPTGGGKSLCYQLPGYLLNGPI
LIVSPLLSLMEDQVEQIKLRGEKSVIALNSTIPFNKRKMYLQSINKYRYIYASPEILQYE
YVQNALMKAKISLFVVDEAHCISQWGHDFRPDYSKLGEIRKKLGQPPCLALTATGTSEVL
EDIQKILQFRSGNKAFIYSIDRPNIALTVEKHKTIDEKITRILHLVRSLKGPGVIYCSSR
LWAERLAQILIESGANGIGYYHGGMDQEQRILIQQQFLYDQLKVVCCTNAFGMGINKQNI
RYVIHFHFPAQLESYMQEIGRAGRDRSPSLAITMLTDADYEVPKSLVESEFPTYDKLYRT
IYFLQANNNEPVSFEKINEQCGLTEIQWRYIENHLMGLNNLKLKPESLISHIWSEIENRI
MIKQEKLRKMTNWLSTEGCRRKKLLAYFNEEYTNPDIRNCCDSCGVDYTIYEGNDESIDQ
VLEVEWEEELKMIFRKASD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcaattaggtattgtgttgaaatcttactttcatcttgaacattttcgaaca
gggcaaaaggaaataattgaagcggtcttaaatgggaaggatgttgtagcgatgcttcct
actggaggaggcaagtcactatgttaccagcttcctggatacctgttaaatggcccaatt
ttaattgtttcacctttgttatctttaatggaggaccaagttgagcaaattaaactaaga
ggcgagaagagcgtcattgcattaaatagcactattccctttaataaaaggaagatgtat
ttacaatctattaacaaatatcgatatatttatgcttctccagaaatccttcaatatgaa
tatgtacaaaatgcattaatgaaagcgaaaatctcattgttcgttgtagatgaagcccat
tgtatctcacagtgggggcatgatttcaggccagactattctaaattaggggagattaga
aaaaaactggggcagcctccttgcttagctttaacagcaacaggaacaagtgaggtactg
gaggacatccaaaaaattcttcaatttcgttcaggaaataaagctttcatctattcaatt
gatcgtccaaatattgcgttaacagtagaaaaacataaaacaattgatgaaaaaataact
cgaatccttcatttagttcgttcattaaaaggtcctggggtcatttattgttcaagtaga
ttgtgggcagaacgactcgcccaaattcttattgaatcaggtgcaaatggtattggttat
tatcatggtggaatggatcaagagcagcgaattctcattcagcagcaatttttatatgat
caactaaaagttgtatgctgtacaaatgcatttggaatgggaattaataagcaaaatatc
cggtatgttatccattttcatttccccgctcaattagaatcttatatgcaggagattgga
agagctggtagagataggtccccaagtcttgcaattacgatgttaacagatgctgattat
gaagtacctaaatcattggtggaatccgaatttccgacttatgataaactttatcgaacg
atttattttttgcaggcaaataataatgaaccagtctctttcgaaaagataaatgaacag
tgtggattaacagaaattcaatggcgatatatagaaaatcacttaatgggtttaaataat
ctgaaactcaagccggagagtcttatttctcacatttggtctgagattgaaaacaggatt
atgattaaacaggaaaaattacgtaagatgacaaattggctttcaactgagggatgtaga
aggaaaaagctattagcttatttcaatgaggaatatactaatcctgatatccggaattgt
tgtgacagctgtggagttgactatacgatctatgagggtaatgatgagagtatagatcaa
gtattagaagtggaatgggaagaagaattaaagatgatttttcgtaaggcgagtgattaa
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