Methanobacterium lacus: Metbo_0616
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Entry
Metbo_0616 CDS
T01437
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mel
Methanobacterium lacus
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mel03016
]
Metbo_0616
Enzymes [BR:
mel01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Metbo_0616
Transfer RNA biogenesis [BR:
mel03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Metbo_0616
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
BpuSI_TRD
Motif
Other DBs
NCBI-ProteinID:
ADZ08867
UniProt:
F0TAB5
LinkDB
All DBs
Position
complement(596190..596693)
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AA seq
167 aa
AA seq
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MNAELSGDIVIVKNGNTAKIHEKSHFGNSSEDGLQLSFVEALYLMEKGKLEVEADGEEIS
IEEMFGFIRKTSAFSNYIVYRDLRNRGYIVKTGFKYGSEFRLYDRGKSPGDGHSNYLVKV
ASENSEFMMSDLSSYVRVAHGVNKKLLFAVVDEENDITYYNVEWTRP
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagaattatctggtgacatcgttatagttaaaaacggaaataccgcaaaaatc
catgaaaaaagccattttggaaattcatctgaggacggacttcaactttcatttgtagaa
gccctttatctaatggaaaagggaaagttagaagttgaagctgatggtgaagaaatttcc
atcgaagagatgttcggattcataaggaaaaccagtgcattttctaattacatcgtgtac
agggacttgcgtaacaggggttacatagtaaaaactggattcaagtatggatctgaattt
agactgtacgatcgtggaaaatcccctggagatggacattcaaactaccttgttaaagtg
gcaagtgaaaacagtgaattcatgatgtctgatctttcaagttatgtcagggtcgcccac
ggagtgaataaaaaattgttatttgctgtggtggacgaggaaaacgatataacttactac
aacgttgaatggactaggccatga
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