Methanobacterium lacus: Metbo_0645
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Entry
Metbo_0645 CDS
T01437
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mel
Methanobacterium lacus
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mel03016
]
Metbo_0645
Enzymes [BR:
mel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Metbo_0645
Transfer RNA biogenesis [BR:
mel03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Metbo_0645
Prokaryotic type
Metbo_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
MptE-like
Motif
Other DBs
NCBI-ProteinID:
ADZ08896
UniProt:
F0TAE4
LinkDB
All DBs
Position
complement(623264..624172)
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AA seq
302 aa
AA seq
DB search
MEIVFLGTSSAIPTNNRNHSALALKAFGEIILFDCGEGTQRQMTRARLSPMKIDRIFVTH
FHGDHILGIPGLIQSMAFRGRRDTLEIYGPPGIQELLNSMKKLGYFALSFNIAVHEIKDG
TVLEEDDFKISAQLMKHSVENYAYCIEEKRDPKFIKEKALKLGIKPGPAYGKLQSGLPVK
IGNKIIKPEEVLGEKRRGRKLVYSGDTLACEEMVGFSKDADVLIHESTFNNSHKEKAFET
GHSTAEMAADIAKKAGVKSLVLTHISTRYKDVKTLEMEALNVFEDSVVAEDLMRLEVEQH
DD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagtatttttaggaacatcatcggcaatacccaccaacaacagaaaccactca
gccttagctctgaaagcctttggagaaatcatactctttgactgtggtgaaggaacacaa
cgacaaatgacccgggccagactgagtcccatgaagatcgatagaatatttgttacacac
ttccatggagatcatatactgggaattccaggattaatacaatcaatggccttcaggggt
agaagagatacgctggaaatatacggaccaccaggtattcaggaacttttgaacagtatg
aagaagttaggttacttcgcactctcattcaacatagctgtccatgaaataaaggatggc
acagttttagaagaggatgattttaaaatttcagcccaacttatgaaacactcagttgaa
aattacgcttactgtatcgaagaaaaaagagaccctaaatttataaaagaaaaggccctg
aaactcggaattaaacctgggccagcctatggtaaattgcaaagcggacttcctgttaag
ataggaaacaaaattatcaaacctgaggaagttttaggagaaaaaagaaggggtagaaag
ttggtttactctggggacacactggcctgtgaagaaatggtgggcttctctaaagatgcg
gatgtattgattcatgaatcaaccttcaacaacagccacaaagaaaaggcatttgaaaca
gggcattcaactgctgaaatggctgcagacattgcaaaaaaagcaggtgtgaaaagtttg
gtcctgacccatataagcaccaggtacaaggatgttaaaactcttgaaatggaagctcta
aatgtttttgaggattctgtagtggccgaagatctaatgaggttggaggttgaacagcat
gacgattga
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