Methanobacterium lacus: Metbo_1642
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Entry
Metbo_1642 CDS
T01437
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mel
Methanobacterium lacus
Pathway
mel03420
Nucleotide excision repair
mel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Metbo_1642
03430 Mismatch repair
Metbo_1642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mel03400
]
Metbo_1642
Enzymes [BR:
mel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Metbo_1642
DNA repair and recombination proteins [BR:
mel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Metbo_1642
MMR (mismatch excision repair)
Other MMR factors
Metbo_1642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
ResIII
AAA_11
MitMem_reg
Motif
Other DBs
NCBI-ProteinID:
ADZ09868
UniProt:
F0T9B7
LinkDB
All DBs
Position
complement(1689428..1692229)
Genome browser
AA seq
933 aa
AA seq
DB search
MNSICNREDSCTSAQREAAKHFEGPLLIVAGPGAGKTRVLVERVAYLVKKKKVDPSNILV
ITFTVKAAEELKARLSHCVGQEIVSMQISTIHSFCHEILRDYSDYHELGATFDVLDSEMQ
LMFMRANFYKLGINRLVNMGRISEVLDGFNKCGENIIPPNELSEHLKKRYPDNKKYQEFC
KSYEKYLEALGEQKKIDFAGLQINVLKLLKNNPDVLKAIRDKYRFILVDEYQDTNPIQDE
FFDLISNTHKNICVVGDEDQSIYAFRGADPWNFIRFKEKYDSKYVSLDKNFRSTSNIVKL
FDGFMENYRSYPKKIEPSRECGNNIIILKSDDVTDEAKNVVRTIKQLKEDGIIPHYGYVA
LLFRSVRYHANKIIAELKKNDIPYTVKGHGSFLDRKEIQTMLYMLSYVDPPSYDDRFTSW
NNWWNISMFETEFLNLNPKTVEALYNLEKDFDISSLLTKQEFVDIGMEDDQDINKLQQLN
QLKQELSEKPRTILQTYYDILEISGYLKWLVTDETPKNQEKIYNLAQLSSILNKYEYMNK
NPKIKDFMFYLYLLPSGMQYDEHVVDNPFSVNISTVHQSKGLEFPVVFICSVIKNRFPGR
KKKEKNLVPIPQELLLKFKKKDLTLLTEDTILPDEFDMEERRLFYVAMTRAQDVLVVSTA
DKIKVNKVGYSPYVKEIEKIEEVTNSCKFMEMCKDRDLSKEKPISLSYSSIDTYNRCPFM
YKMLYEYGFQTPPSYMQNYGIIIHNCLEKIHIGLKNDENIDGSRIKEIVQTCWITLHTNK
KKDENQRMMVERNLLDYVHEVKDHSRKIISAEEPFSIVKKNMEINGRTDLILENNQGEIE
LLDFKAREQMGIEKTSVEFQLKMYEYALKDKYKFDKLCAYTFKDKQKTFFDSKPEDIDEL
DKNLEKLCDKINEHEFTPKESNFCTHCGFKFCC
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaatatgtaacagggaagatagttgcacttctgcacagagggaagcagcaaaa
cattttgaaggtccattattaattgtggcaggtccgggcgctggaaaaacaagggtactt
gttgaaagggttgcgtatctagttaaaaagaagaaggtggatccaagcaacatcctcgtt
ataaccttcacagttaaagctgcagaggaattaaaagccagattaagccactgtgtgggg
caagaaatagtttcaatgcagatatccaccattcactcattctgtcacgaaatattgagg
gactactcagattatcatgagttaggtgcaacctttgatgttttagatagtgaaatgcag
ctcatgttcatgagggcaaacttctacaaactgggaataaacagacttgttaatatgggc
agaatttctgaagtattagatggatttaataagtgcggagagaacatcatccctccaaac
gaactatcagagcacctgaaaaaaagatatcctgacaacaagaaatatcaggaattctgc
aaatcctacgaaaaatatttggaggcccttggagaacaaaagaaaatagactttgcaggc
ctacaaattaacgtattaaaacttttaaagaataatcctgatgttttaaaggcaattcga
gataagtacaggtttattttggttgatgagtaccaagacaccaacccaatacaggacgaa
ttttttgatctaatttcaaacacgcacaaaaatatctgtgtggttggggatgaggatcaa
agtatatacgcttttcgtggggcggatccttggaacttcatacggttcaaggagaagtat
gattcaaagtatgtttccctcgataaaaacttccgttcaacatctaacatagtaaaacta
ttcgatggattcatggaaaactacagatcctacccaaagaagatagaaccttcaagggaa
tgtggaaacaacataatcatactaaaaagtgacgatgttacagacgaagcaaaaaatgtt
gttagaaccataaaacaactaaaagaagatggtataattccacactacggttatgttgca
cttctatttagaagtgtgaggtatcatgcaaataaaataattgcagaacttaaaaagaac
gacataccatacacagtcaaaggacatggatcgtttttagacaggaaagaaatccaaaca
atgctttacatgttgtcatacgtagatccacccagttatgatgacagattcacatcatgg
aacaactggtggaatatttcaatgttcgaaacagagtttttaaatttgaacccaaaaact
gttgaagcactgtacaaccttgaaaaagactttgatatcagttctctcctgacaaaacaa
gaatttgtagatattggaatggaagatgatcaggatataaacaagttacaacagttaaac
cagttgaaacaggaactttcagagaaaccacgaaccatactccaaacctactatgatatc
ctagagatttcaggttatttgaaatggttggtcactgatgaaaccccaaaaaatcaggag
aagatctacaatctggcccagctgagttcaattttaaacaagtacgaatacatgaacaaa
aacccgaaaattaaggatttcatgttttatctctatctactaccaagtggaatgcagtac
gacgaacatgttgtggacaatcccttttcagttaatatatcaacggtacatcagtccaaa
ggcctggaatttccagttgttttcatatgttctgttattaagaacagatttcctggaagg
aagaaaaaagaaaaaaatttagtacccataccccaagaactccttttaaaatttaaaaaa
aaggatttaaccctgttaacagaagacacaattttgcccgatgaatttgatatggaggaa
cgcagattgttttacgttgccatgacaagggcccaggatgtgctggtggtttcaactgca
gacaagataaaggttaacaaagttggttactctccctacgtgaaggagatagagaagatt
gaagaggtaactaacagctgcaaattcatggaaatgtgcaaagatcgagatttgtcaaag
gaaaaaccaatatccctaagttattcctcaatagacacctacaacaggtgtccattcatg
tataaaatgctttatgaatacggatttcaaactcctccctcttacatgcaaaattatggt
attataatccacaactgtcttgaaaaaattcatataggccttaaaaacgatgaaaatatc
gatggatcccgaattaaagaaatagtccaaacatgttggataactcttcacactaacaag
aagaaggatgaaaatcagaggatgatggtggaaagaaatttattggactacgtccacgaa
gtgaaggatcacagcagaaaaataatttcagcagaagaaccattttccatcgtcaaaaag
aatatggagataaatggacgtacagatttgatacttgaaaataatcagggtgaaatagaa
ctgttagatttcaaggcaagggaacagatgggaatagaaaaaacaagtgttgaattccaa
ctaaaaatgtatgagtatgcattgaaggataaatacaaatttgataaactctgtgcatac
acatttaaagacaaacaaaagactttcttcgattccaaacctgaagatattgatgaactt
gataagaatttggaaaaattatgcgacaaaataaatgaacatgaattcacacctaaagaa
agcaacttctgcacacactgcggatttaaattctgctgttaa
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