Methanobacterium lacus: Metbo_1780
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Entry
Metbo_1780 CDS
T01437
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mel
Methanobacterium lacus
Pathway
mel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Metbo_1780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mel03021
]
Metbo_1780
Transcription machinery [BR:
mel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Metbo_1780
Prokaryotic type
Archaeal type
TFB
Metbo_1780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Lar_restr_allev
Ribosomal_S27e
Sigma70_r4
UPF0181
OrfB_Zn_ribbon
LysW-like_globular
zinc_ribbon_4
DUF3797
Cyclin_C
HTH_Tnp_ISL3
HTH_AsnC-type
DZR
Ribosomal_S27
Elf1
Motif
Other DBs
NCBI-ProteinID:
ADZ10002
UniProt:
F0TA52
LinkDB
All DBs
Position
1819988..1820965
Genome browser
AA seq
325 aa
AA seq
DB search
MDNTHDPDVSGKEQMKQEVSEIEKKETRCPECGSEQIINDPERGEVACGACGLVIDDNIM
DMGPEWRAFDNEQRDKRTRVGAPMTYTIHDKGLSTMIDWRNKDIYGRDIPARNRAQWYRL
RKWQRKIRISGATERNLAFALSELDRDSSRLGLPRSVREAASVVYRNAVENKLIRGRSIE
GVVAASLYAACRKCNVPRTLDEIAEVSRVGKKEVGRTYRFLTRELNIKLPPTSPVDYIPR
FASELNLSGEVQSKAIEIINNAMAKGLTSGKGPTGVAAAALYIASVLLGERKTQRDVAEV
AGVTEVTIRNRYKELSEEIEMGLTI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggataatactcatgatcctgatgtttcaggaaaagaacagatgaaacaggaagtttca
gaaattgaaaagaaggaaaccagatgtccagaatgtggatctgaacagatcataaacgat
ccagaacgtggagaggtcgcatgcggagcttgtggactggtgatcgacgacaatataatg
gacatgggacctgaatggagagcatttgataatgaacagcgtgataaaagaaccagggta
ggggcaccaatgacctacaccattcacgacaagggactttccaccatgatcgactggaga
aacaaggatatctacggtcgtgacattcctgccagaaaccgtgcccagtggtacaggctc
agaaaatggcagagaaaaatcagaatttccggagcaacggaaagaaaccttgcatttgca
ctgtccgaactggatagggactcctcaagactgggacttccaagaagtgttcgtgaagca
gcttcagttgtttacaggaacgctgttgaaaacaaactcatcagaggaagaagtatcgaa
ggagtagttgcagcatcactctacgcagcctgccgtaaatgtaacgttccaagaaccttg
gatgaaatagcagaagtatccagggtgggtaaaaaggaagttggaagaacctacaggttc
ttaacccgtgaactcaacatcaaactaccaccaacatcccctgtagattacataccaagg
tttgcaagtgaactgaacctttcaggagaagtacaatccaaggccatcgaaataattaac
aacgccatggcaaagggacttacatcaggtaaaggtccgacaggagttgcagcagcagca
ctctacatagcatcagtacttcttggagagagaaaaacccaaagggacgttgcagaagtc
gctggtgtgacagaagtaaccataagaaacaggtacaaagaactaagcgaagaaatagaa
atgggtttaaccatttaa
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