Methanobacterium lacus: Metbo_2064
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Entry
Metbo_2064 CDS
T01437
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mel
Methanobacterium lacus
Pathway
mel04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Metbo_2064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mel03019
]
Metbo_2064
03009 Ribosome biogenesis [BR:
mel03009
]
Metbo_2064
04131 Membrane trafficking [BR:
mel04131
]
Metbo_2064
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mel04147
]
Metbo_2064
Messenger RNA biogenesis [BR:
mel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Metbo_2064
Ribosome biogenesis [BR:
mel03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Metbo_2064
Membrane trafficking [BR:
mel04131
]
SNARE
SNARE associated proteins
Others
Metbo_2064
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Metbo_2064
Exosome [BR:
mel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Metbo_2064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
TIP49
AAA_22
AAA_14
CDC48_2
AAA_5
AAA_33
Sigma54_activat
nSTAND3
AAA_lid_PRS2_C
AAA_28
RNA_helicase
Mg_chelatase
NPHP3_N
AAA_24
ATPase
AAA_3
AAA_7
AAA_18
ABC_tran
IstB_IS21
Parvo_NS1
SLFN-g3_helicase
NB-ARC
PhoH
AAA_11
Zeta_toxin
Bac_DnaA
ATPase_2
DUF815
Vps4_C
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
ADZ10283
UniProt:
F0TBU1
LinkDB
All DBs
Position
2106776..2108965
Genome browser
AA seq
729 aa
AA seq
DB search
MENKEMKLKVAEAFSQADVGRSVARIDPACMQKLDLLDGDIIEIEGKKLTATRVASSQSD
IGLGIIRIDGYIRKNSGTSIGEEVTVRHADYKEAKKVVLAPVEQEILVRGDVKSAFLGRV
LSQGDMIITGVRQQQQQQTMRSGLFDEFFRDVAPMGEIKLAVVTTKPAGIVQITEMTDVE
VQTEPVDVSKLEGVKNVVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGIAPPKGV
LMHGPPGTGKTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLRELFEEAEENAPSII
FIDEIDAIAPKREEVSGEVERRTVAQLLTLMDGLKSRGQVVVIGATNRPDALDAAIRRGG
RFDREIEIGVPDKDGRGEVLQIHTRGMPLDDKVDLEEMADITHGFVGADLESLCKEAAMR
VLRRVLPDIKGDEEISKETLKKMIVTKTDFKEALKEVQPSALREVLVQVPDVKWDDIGGL
TSAKQELQEAVEWPLKYPESFEKFGVRPPRGVLIYGPPGTGKTLLAKAVANESDANFIAV
KGPELLSKWVGESEKGVREVFRKARQTAPTVIFFDEIDSIASARSGSSTDSGVTQRVVNQ
LLTEIDGLEELQDVAVIAATNRVDILDPALTRPGRFDRHVKVDDPDETARLSIFEVHTKD
MPLAEDVDLEVLSKRTHGFVGADIEAVCREAVMLTLRENIKSELVDMKHFQEAIKKVKPK
HESDLSHYS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaagaaatgaaattaaaagttgctgaagccttctcacaggctgatgttgga
aggtcagttgcaaggatcgaccctgcatgcatgcagaaactcgaccttttagacggagac
atcatagaaattgagggaaaaaaattaactgcaaccagggttgcatcctcacaatccgat
attggccttggaataatacgcatagacggctacatcagaaaaaattcaggaacatccatt
ggtgaagaagtaactgtcagacatgccgactacaaagaagccaagaaagtagtactcgcc
ccagttgaacaggagatactcgtaaggggagatgttaaatcagcatttcttggaagggta
ctcagccagggagacatgataataactggcgtaagacagcaacagcaacagcaaaccatg
cgttcaggactattcgatgagttcttcagggacgttgctccaatgggcgagatcaaactc
gcagttgtaaccaccaaacctgcaggaatcgtacagatcactgaaatgacagatgttgaa
gtgcaaacagaacccgtcgacgtatcaaaactcgaaggagttaaaaacgtagttgatgta
acctacgaagatataggtggtcttaaggaagaagttaaaaaagtcagggaaatgatagaa
atacccctgaagagaccagaattatttgaaagactgggaattgcaccacctaaaggtgta
ttaatgcacggtccaccaggaacaggtaaaacattgcttgcaaaggcagttgcaaacgaa
agtgatgcccacttcatagccataaacggacccgagatcatgagtaaatacgtcggagga
tcagaggaacgtttaagggaactgtttgaagaagcagaagaaaacgcaccatcaatcata
ttcatagatgaaattgacgccatagctccaaaaagagaagaggtatccggagaagttgaa
agaagaacagtagcacagcttttaacactcatggatggtcttaaatcaagaggacaagtc
gttgtaataggagcaaccaacagaccagacgcactagacgctgcaataagaagaggcgga
aggtttgacagagaaattgaaattggagtgccagataaagatggaaggggagaagtcctt
cagatacacaccaggggaatgccactggatgacaaagtggatctcgaagaaatggcagac
ataacccacggatttgtcggtgcagaccttgaatcactctgtaaagaagctgcaatgagg
gtactaaggagagttcttccagacataaaaggagacgaagaaatatccaaggaaaccctt
aagaaaatgattgtaaccaaaacagatttcaaggaagctctcaaagaagtccaaccttca
gcactgcgtgaagtcctagttcaagtgcccgatgttaaatgggatgacataggaggattg
acaagcgccaaacaggaacttcaagaggcagttgaatggcctttaaaatatcctgaaagc
tttgaaaaattcggtgtgagaccaccaagaggagtgctcatatacggacctccaggaaca
ggtaaaaccctacttgcaaaggcagttgcaaacgaaagtgatgccaacttcatagcagtc
aagggaccggaattactctcaaaatgggttggagaatctgaaaagggtgtgcgcgaagtc
ttcagaaaagccagacaaacagcaccaacagtaatattcttcgatgaaatcgattcaata
gcatccgcaagaagcggatcaagcacagattccggtgtaacacagcgtgttgtaaaccaa
ctcttaacagagattgacggtttagaagaactgcaggacgtggctgtgattgctgcaacc
aaccgtgtagatatacttgaccctgccctaacaagacctggaagatttgacaggcatgta
aaggtagatgatccagatgaaacagcaaggttatccatattcgaagttcacaccaaggat
atgccacttgcagaggatgtggatctagaagttctatcaaaaagaacacatggatttgtt
ggagcagatatcgaagcagtctgcagagaagcagtgatgctcacactcagggaaaacata
aaatccgaactagtggatatgaaacacttccaggaagctattaaaaaagttaaacctaaa
catgaatcagatctaagccactacagttaa
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