KEGG   Methanobacterium lacus: Metbo_2068
Entry
Metbo_2068        CDS       T01437                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mel  Methanobacterium lacus
Pathway
mel03030  DNA replication
mel03410  Base excision repair
mel03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metbo_2068
   03410 Base excision repair
    Metbo_2068
   03450 Non-homologous end-joining
    Metbo_2068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mel03032]
    Metbo_2068
   03400 DNA repair and recombination proteins [BR:mel03400]
    Metbo_2068
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mel04147]
    Metbo_2068
DNA replication proteins [BR:mel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metbo_2068
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metbo_2068
DNA repair and recombination proteins [BR:mel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metbo_2068
Exosome [BR:mel04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Metbo_2068
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: ADZ10287
UniProt: F0TBU5
LinkDB
Position
complement(2111998..2112984)
AA seq 328 aa
MGVKFKDIVTPENIKFQDLESKIVALDAANVIYQFLSSIRQVDGTPLMDENKNITSHFSG
ILYRTSSLIEKGIKPIYIFDGVSDALKKDTQDKRREVKEESQKKWDKALEEGNLEEARKY
AVRSSRMSRDIIEGSKKLLEILGVPYIQALGEGEAQASYMVENGDAWCVGSQDYDCILFG
ATRMVRNLTITGGKANLELITLKKVLENMEITREQLVDIAILVGTDFNRGVKGVGAKTGL
KLIKKHGDIFNVIEKNDYEMDVDPTILRNMFLEHNVVKDYELKWNSPDKEAAVEFLCDQH
DFSEQRVLSALDKFAKLDNKQKSLEDWF
NT seq 987 nt   +upstreamnt  +downstreamnt
atgggtgtaaaatttaaagatattgtaactccagaaaacatcaaatttcaggacttagaa
tcaaaaatagttgcgttagacgctgcaaatgtaatttatcagtttttatcaagcatcaga
caggtggatggaacaccgctcatggatgaaaacaaaaatatcacatcccacttcagtgga
atactgtatcgaacatcatccctcatagaaaagggaattaaacccatatacatctttgac
ggagtatcagatgcacttaaaaaggacacccaagataaaagaagggaagtgaaagaagaa
tcccagaaaaaatgggataaagcccttgaagagggtaacttggaagaggcaaggaagtac
gctgtaagatcctccaggatgtccagggacatcattgaagggtcgaaaaaactattagag
attcttggagtaccctacatccaggcactgggtgagggagaagcacaagcatcgtacatg
gttgaaaatggagatgcatggtgtgtgggttcgcaggattacgactgcatcctcttcggg
gccacgaggatggttagaaacttaaccataactggtggaaaagcaaatcttgagttaatc
acccttaaaaaagtgcttgaaaacatggagatcacaagggaacagcttgtagacatagcc
atacttgtgggaactgattttaacaggggagttaaaggtgtgggtgcaaaaacaggtttg
aaactcataaaaaaacatggagacatattcaatgtcatagaaaagaatgactatgaaatg
gatgttgatccaaccatactacggaacatgttcttagaacacaatgtggtcaaggactac
gaactaaaatggaattctcctgataaagaagctgctgtagaattcctttgtgaccagcac
gacttttcagagcagagggtacttagtgcacttgacaaatttgccaagctagataacaaa
caaaaaagccttgaagactggttctaa

DBGET integrated database retrieval system