Methanobacterium lacus: Metbo_2078
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Entry
Metbo_2078 CDS
T01437
Name
(GenBank) protein of unknown function DUF87
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mel
Methanobacterium lacus
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mel03400
]
Metbo_2078
DNA repair and recombination proteins [BR:
mel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Metbo_2078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
AAA_10
T4SS-DNA_transf
FtsK_SpoIIIE
TrwB_AAD_bind
eWH_GTF3C1
Motif
Other DBs
NCBI-ProteinID:
ADZ10297
UniProt:
F0TBV5
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Position
complement(2124209..2125744)
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AA seq
511 aa
AA seq
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MTGEVIGRCVGETSLVDVSFISKEMPMMGEYVTMEYDGKKVLGMIEGLVRGSVSINNEIY
DPKTIEKIRRMEGDDHYIRGNVRILGDVENNLRIPRTPAPPGTEIRSADSEILKKIFQVD
VAGLKLGNLITQENVPVEVDINKMVSRHLAVLAMTGAGKSNTVSVIVNGLLNVNGSVLIF
DMHSEYVNTDFGDDKVNILKPKINPIYMSFSEVKKLSNIPPNAYVQERYFRKAYNSAKND
LKKGGVGNDFIGLLLSKLESWLMEESDESDGKSANSADRKSITDVLNKVEDMKLKYGNIL
SLEAPNIIDSIKVAKANILDLGSVDEFASDVVVSHVLRTVLKSRKDYLRQGEGLKFPVFL
ILEEAHILAPQNRKTESKLWISRIAREGRKFSVGLCMVSQSPKSLDSDALSQANNMIILR
LVEPTDQNHVQRASESLSDDLIAQLPSLNIGEAIILGLMTKIPTLVKIDEFKGKVSGGDL
NVVEEWSKTAEKERSILEEQKREYEDLGGDY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgactggagaagtaattggaaggtgtgtgggtgaaacatcactggttgatgtcagtttt
atatccaaggaaatgcccatgatgggtgagtacgtgaccatggaatacgatggtaaaaag
gtacttggaatgatcgaaggactggtaaggggaagtgtatccataaacaacgaaatctat
gatcctaaaaccatagaaaagatcagaaggatggagggtgatgatcactacatcagggga
aatgtgagaatacttggagacgtggaaaacaacctcagaatacccagaacaccggcacct
ccaggcacagaaatcagatctgcagactctgaaatattgaagaaaatatttcaggtagat
gttgcaggactcaaactcggaaacctgatcacccaggaaaatgttccagtggaggttgac
ataaacaaaatggtatcacgccacctagcagtcctagcaatgaccggagccggaaaatca
aacactgtatcggtaatagtaaacggactcctgaatgtcaatggaagtgttctgatattt
gacatgcactctgaatacgttaacacagacttcggagatgacaaggtcaacatactgaaa
ccaaaaataaatcccatctacatgtccttttcagaggttaaaaaactctcaaacatacct
ccaaatgcatatgtgcaggaaagatacttcagaaaagcctacaactcagccaagaatgac
ctgaaaaagggaggtgttggaaatgatttcataggcctcctactctcaaaacttgaatcc
tggttgatggaagaatcagatgagtccgatggaaaatctgcaaattctgcagacagaaaa
tccataacagacgtactaaacaaggtagaggatatgaagctcaaatacggcaatatcttg
agtctggaagcaccaaacatcatagacagcatcaaagttgccaaggcaaacatccttgat
cttggatcagttgacgaatttgcatcggatgtggttgtaagccacgtgctgagaactgta
ctaaaaagcaggaaagattacttgaggcaaggtgagggtcttaagttcccagttttcctg
atacttgaagaggcacatatactggcaccgcaaaacaggaaaacagaatccaaactatgg
ataagtagaattgccagggagggacgtaaattttcagttggattgtgtatggtgagccaa
agcccaaaatccctagattcagatgcactgtcacaggcaaacaacatgatcatactcaga
ctcgtggaacccacagaccagaatcatgttcaaagggcaagtgaaagtttgagtgatgat
ttaatagcccaactaccctcactcaacattggagaagcaataatactcggattaatgacc
aagataccaacactcgtgaagatagatgaatttaagggcaaagtatcgggaggagatctt
aacgtggttgaagaatggtcaaaaacagccgaaaaagagagatccatccttgaagaacag
aagagggaatatgaggatcttggaggagattactga
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