Methanobacterium lacus: Metbo_2339
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Entry
Metbo_2339 CDS
T01437
Name
(GenBank) Peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mel
Methanobacterium lacus
Pathway
mel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Metbo_2339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mel03019
]
Metbo_2339
03012 Translation factors [BR:
mel03012
]
Metbo_2339
Messenger RNA biogenesis [BR:
mel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Metbo_2339
Translation factors [BR:
mel03012
]
Eukaryotic type
Release factors
Metbo_2339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_8
DZR
PWP3A-B_C
Zn_ribbon_Elf1
Abhydrolase_7
DUF3300
Motif
Other DBs
NCBI-ProteinID:
ADZ10552
UniProt:
F0T645
LinkDB
All DBs
Position
2381806..2383035
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AA seq
409 aa
AA seq
DB search
MSEVSSKELYEVKRTLKELADKKGRGTELVTVYIPPEKQISDVVKHMREELSQSANIKSK
QTKKNVQSAIEVIMQRMKLFPKPPEKGLVLFVGMIPRGGPGTEKMETYMFEPPEPVQTYI
YHCDSTFYLKPLEEIIEDKDVYGLAVIDRKEATIAILRGKRIDIIKNLTSGVPGKHKAGG
QSQRRFDRLIDLAAHEFLKRIGTHMNEAFLDVPDLKGVIIGGPGHTKEEFVEGDYLHHEI
KNKLITTVDTSYTGEFGIREVMEKSMDVLTEIDVVREKKLVQKFLVELIDEHGLASYGEA
EVRKNLQMGAVEVLLLSEDLKSKRLNYECPTCGTKAEKTLKSDVAIPEKTCSNCNERMKV
EETVDIIDDFVELAEEVGSEVEIISTETEEGMQLFRAFGGVGAILRYRL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagtatcatctaaagagctgtacgaagtaaaaagaacccttaaagagttagca
gataaaaagggcagaggtacagaattagtaactgtttatattccacctgaaaagcagata
agtgatgttgttaagcatatgcgtgaagaacttagccagagtgccaacatcaaaagtaaa
caaaccaagaaaaatgttcaatctgcaatcgaagtcataatgcaaaggatgaaactgttt
cccaaacctccagaaaagggtttggtgctgtttgtgggaatgatacctagggggggtcct
ggaacagaaaaaatggaaacatacatgttcgaacctcctgaaccagttcaaacctacatt
taccactgtgattcaacattttatcttaaacccctcgaggaaatcatcgaggataaagat
gtctacggacttgcagtcatagatcgtaaggaagcaaccattgcaatcctacgcggaaaa
aggatcgacatcataaaaaacctaaccagtggtgttcctggaaaacataaagcaggagga
caatcccagagaagattcgacaggctcatcgatcttgcagcacacgaatttttaaaaagg
ataggaacgcacatgaacgaagcatttttagatgttcccgatcttaagggagtgattatt
ggtggacccggccatacaaaggaagaatttgttgaaggggactacttgcaccatgaaata
aagaacaaactcatcaccaccgttgacacatcctacactggagaatttggtataagggaa
gttatggaaaagtccatggatgttttgacagaaatagatgttgtcagagagaaaaagttg
gttcaaaaatttctggttgaattaattgatgaacatggtctggcatcttatggagaagcc
gaagtcagaaaaaatttacagatgggtgctgtggaagtacttttactttcagaagatctt
aaatccaaaaggttgaactacgaatgtccaacctgcggaacaaaagctgaaaaaactttg
aaatctgatgtagccattcctgaaaaaacctgttctaactgtaatgagagaatgaaggtt
gaagaaacagttgacatcattgatgattttgttgaactagcagaagaagttggttcggaa
gtagaaattatttcaacagaaactgaagaaggaatgcagcttttcagagcgtttggtggt
gttggagccatattaagatacaggctctaa
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