Methanobacterium lacus: Metbo_2396
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Entry
Metbo_2396 CDS
T01437
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mel
Methanobacterium lacus
Pathway
mel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metbo_2396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mel03021
]
Metbo_2396
Enzymes [BR:
mel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metbo_2396
Transcription machinery [BR:
mel03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Metbo_2396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
USP7_ICP0_bdg
NleF_casp_inhib
Motif
Other DBs
NCBI-ProteinID:
ADZ10609
UniProt:
F0T6H5
LinkDB
All DBs
Position
complement(2436060..2438675)
Genome browser
AA seq
871 aa
AA seq
DB search
MKGILKKISQIDFGLMSPENIRKMSVTKIVTPDTYDEDGYPIEAGLMDPRLGVIDPGLRC
RSCGSKGGDCQGHFGHINLARPVIHVGFADTIHKILRSTCKDCGQVLLTESEKVDYKEKI
ETLIKNEESITGIIKEIYAVARRDKCPSCGEEQEDVKIDKPVSIVEGNYKLTASEVRERL
EAIPQDDYIYIGINHEVAKPEWMVLTVLPVPPVTVRPSITLETGERSEDDLTHKLVDILR
INQRLKENMEAGAPQLIVEDLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKG
KEGRFRSNLSGKRVNFSARTVISPDPNISINEVGVPEMIATEVTVPVFVTEWNIEKMKEY
IMNGPKKHPGANYVIRPDDRKIRVYDETKETVIEKLEPGFVVERHLMDGDVVLFNRQPSL
HRMSMMAHEVKVLPYKTFRLNLCVCPPYNADFDGDEMNMHVFQTEESRAEAKSLMRVQEH
ILSPRFGGPIIGGIHDHISGAYLLTREGSNFSEEDVFQMVKRARMELPKATGKDWTGKQV
FSLLLPNDLNMVYRAEICRKCDECLKLECKNDAYVVIEDGQIKSGAMDEKAYGAFSGKIL
DSIVKEYGTDKAREFLDTSTKLAIAGIMKRGFTTSTADEEIPKEAKDRIEQLLANAEQRV
EQLIDAYHNEELEALPGRSLRETLEMKIMQVLGEARDKSGEIAESYFGMENHAVIMALTG
ARGSMLNLTQIAACVGQQSVRGGRIERGYSKRTLPHFYVGEMGAKASGFVHSSYKKGLDP
LEFFFHAMGGREGLVDTAIRTAQSGYMQRRLVNALQDLNVQLDGTVRDNRGVIIQTQYGE
DGIDPAKSDYGKVADIDRMIEEMRIKSKAGK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggaattttaaaaaagatttcccaaatcgactttggtttgatgtctcccgagaac
attaggaaaatgtccgttaccaagatagtaacaccggacacctacgatgaggacggctat
ccaatagaagcaggacttatggatccaaggctaggagttattgaccctggtctcagatgc
aggtcatgtggatcaaagggtggagattgtcagggacactttggacacatcaatctagca
agaccagttatccatgtgggatttgcagataccatccacaaaatactcaggtcaacatgt
aaggattgtggacaggttcttttgacagaatcagaaaaggtggattacaaggaaaaaata
gagactctaatcaaaaatgaggagagtattacaggaattatcaaggaaatttatgcagtt
gccagaagggacaagtgcccaagctgtggtgaagaacaggaagatgttaaaattgacaaa
cctgtttcaattgtcgaaggtaactacaaactcaccgcaagtgaggtaagggaacggttg
gaagcaattcctcaagatgattacatctacatcggtatcaaccatgaagttgcaaaacca
gagtggatggttctgactgttcttccagtacctccggttacagtgagaccttcaattacc
ttggaaactggtgaaagatcagaggacgatctaactcacaaactcgttgatatattgagg
atcaaccagcgacttaaggaaaacatggaagcaggagcaccacaactaattgttgaggat
ctttgggaacttctacagtaccatgttacaacctactttgataacgaagcatctggagta
cctccagccagacacaggtcaggaagacctttaaaaacgttagcacaacgtttaaaaggt
aaagaaggacgtttcagaagtaacctttcaggtaaacgtgtaaacttctctgctaggact
gtaatatcaccagatcctaacatcagtataaatgaagttggtgtgcctgagatgatagcc
acagaagtgactgtaccagtatttgtcacagagtggaacatcgagaaaatgaaagagtac
ataatgaacggaccaaaaaaacatcctggtgccaactacgttataaggcctgatgacagg
aagatcagggtttacgatgaaactaaggaaactgtcatagaaaaattggaacctggattt
gttgttgaaagacacctcatggatggggatgtggttctgtttaacagacaaccttcactt
cacaggatgtccatgatggcccacgaggtaaaggttcttccttacaaaacattcaggttg
aacctgtgtgtatgccctccatacaacgctgattttgatggggacgaaatgaacatgcac
gtattccagacagaagagtcacgtgcagaagcaaagtcactcatgagggttcaggaacac
atattgtctccaaggtttggaggccctattattggtggaatacacgatcacatatctgga
gcatatcttttaacaagggaaggttcaaacttctctgaagaagatgttttccaaatggtc
aaacgtgcaagaatggaactaccaaaagcaacaggtaaagattggactggaaaacaagtt
ttcagccttctcctgccgaacgatctcaacatggtttacagggcagagatatgcagaaaa
tgtgatgaatgtttgaagctggaatgtaaaaacgatgcatacgttgtgattgaagatggc
cagataaaaagtggtgccatggatgaaaaagcatatggagcattttccggtaaaatttta
gattccattgttaaggaatacggaacagacaaggcaagggaatttttagacacttcaacc
aaacttgcaattgcaggaatcatgaaacgaggtttcacaaccagtactgccgatgaggaa
attcctaaggaagccaaggatcgtattgaacagcttcttgcaaatgctgagcaacgtgtt
gaacaactcattgatgcataccacaacgaagaactggaagcacttccaggaaggagtctc
agggaaactttggaaatgaagatcatgcaagttcttggtgaggcaagggataaatctggt
gaaatagcagaaagttactttggaatggaaaaccatgcggttattatggctcttactggt
gcaagaggttcaatgttgaacttaactcagattgcagcatgtgtgggtcagcagtctgtt
cgtggtggccgtattgaaagaggttattctaaacgtacgttaccgcatttctatgtaggt
gaaatgggtgcgaaggcgagtggatttgtacattcaagctacaagaaaggtctcgatccc
ctagaattcttcttccatgcaatgggtggaagggaaggactggtagatacagctatacgt
acagctcaaagtggttacatgcaaagaagactggtcaacgctcttcaagatttgaatgta
caacttgatggtacagtcagggataacaggggagtaattatccagacacaatatggtgaa
gatggaattgaccctgccaagagtgactatggtaaagttgcagacatagacaggatgatt
gaagagatgaggataaaatccaaggctggaaaataa
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