Methanobacterium lacus: Metbo_2397
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Entry
Metbo_2397 CDS
T01437
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mel
Methanobacterium lacus
Pathway
mel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metbo_2397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mel03021
]
Metbo_2397
Enzymes [BR:
mel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metbo_2397
Transcription machinery [BR:
mel03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Metbo_2397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Zf_2nd_IFT121
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ADZ10610
UniProt:
F0T6H6
LinkDB
All DBs
Position
complement(2438746..2440557)
Genome browser
AA seq
603 aa
AA seq
DB search
MKKSKIYINGKIIGTSDDPEDFVRSMREKRRTGEVSPEMNITYYKETDEIFLFTDPGRTR
RPLIVVENGESKLTEETIQLIEDGELDWEGLINQGIIEYMDAEEEENSYIAMFPEDITEN
HSHLEIDPSTMLGICAGIIPFANHNSSPRNTMEAGMTKQALGLYVSNYNMRTDTRAHLLH
HPQVPLVKTKSMDATKYDKRPSGQNFVVAVMSYEGYNMEDALILNKASIERGLARSSFFR
SYEASERRYPGGQEDKFEVPENIVRGYRSEEVYRHLDEDGIVNPEVEVKSGDVLIGKTSP
PRFLEEIDEFGTVAERRRETSVTVRHGEHGVVDAVLLTETVEGSKLAKIRVRDQRQPEFG
DKFASRHGQKGVVGLIVSQENMPFTEVGVVPDLIINPHAIPSRMSVGQVIEMLAGKAGTM
EGKRMDGTPFGGKQEAEIMELLKQNGFETAGRESLYNGITGERIEAEIFVGVAFYQKLHH
MTADKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEALVCQDCGMIAIYDRIRDKKYCAICGESETFPVEISYAFKLLLDELKSLCIFPKLVLE
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaatccaagatatatattaacggcaaaatcatcgggacaagtgatgatccagaa
gactttgttaggtccatgagggaaaaacgaagaactggtgaagtatctcccgaaatgaac
ataacctactataaagaaacagatgaaattttcctattcactgatccaggccgaaccaga
aggccactaatagtagttgaaaacggagagtccaaactcacagaagaaaccatacaattg
attgaagatggtgaattagattgggaaggtcttatcaaccagggaataattgaatacatg
gatgcagaggaagaagaaaactcctacattgccatgtttccagaagacataactgagaat
catagccatctggagatagatccctccacaatgttgggaatctgtgcaggtatcattcca
tttgcaaaccataattcctctccaaggaacaccatggaagcaggaatgaccaaacaagca
cttggtctttacgtatccaactacaacatgagaacagatacacgtgctcatttattacat
catccacaagtaccactggtaaaaaccaaaagtatggatgcaaccaagtacgataaacgt
ccttcaggacagaacttcgttgtagcagttatgtcgtacgaagggtacaacatggaagat
gcactaattttaaacaaagcatccattgaaaggggccttgcaagatcctcatttttcagg
tcctacgaagcttcagaaagacgttaccctggtggacaggaagacaagttcgaagttcca
gaaaatattgttaggggctacagatcagaggaagtttacagacatcttgatgaagatgga
atagtcaaccctgaagttgaggtcaaatctggagatgttctcataggtaaaacatcacct
ccaagattccttgaagaaatagacgaattcggaacagttgcagagagaagaagagaaaca
tctgtaacagtgagacacggtgaacacggtgttgttgatgcagttcttttgactgaaaca
gttgaaggcagtaaactggccaagataagggtcagggatcagagacaacctgagtttggt
gataaattcgcatcaaggcacggtcagaagggagttgttggactcatagtttcccaggaa
aacatgccttttacagaagttggcgtcgtaccagatctcataataaatccacacgcaatt
ccttcaaggatgtctgtgggtcaagttatagagatgcttgcaggtaaagccggaaccatg
gaaggtaaacggatggacggtactccatttggaggtaaacaggaagcggaaatcatggaa
ctactcaaacagaatggtttcgaaactgctggtcgtgaatctctctacaatggaataact
ggagaaagaattgaagctgaaatatttgttggagtagctttctaccagaaactgcaccac
atgacagcagacaaagtttatgcaagatccagaggtccagtacaggttttaacaaggcaa
cctacagaaggtagggcaagagaaggtggattaagatttggtgagatggaaagggattgt
ctcattgcacacggtgcggcattagctttaaaagaaaggctattggatgaatctgataag
tatgaagcccttgtatgccaagattgtggtatgatagccatatacgacaggatacgagat
aaaaaatactgtgctatctgtggagaatcagaaactttcccagttgagatttcatacgca
ttcaaacttttactcgacgaactaaagagcctatgtatattccctaaattggttcttgag
gacaaagcatag
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