Melaminivora suipulveris: C6568_00230
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Entry
C6568_00230 CDS
T05358
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mela
Melaminivora suipulveris
Pathway
mela03030
DNA replication
mela03430
Mismatch repair
mela03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mela00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6568_00230
03430 Mismatch repair
C6568_00230
03440 Homologous recombination
C6568_00230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mela03032
]
C6568_00230
03400 DNA repair and recombination proteins [BR:
mela03400
]
C6568_00230
Enzymes [BR:
mela01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6568_00230
DNA replication proteins [BR:
mela03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C6568_00230
DNA repair and recombination proteins [BR:
mela03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C6568_00230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AVO47856
UniProt:
A0A2R3Q7U9
LinkDB
All DBs
Position
45120..48665
Genome browser
AA seq
1181 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTTRIDEAVGLAAAAGQPAMAITDLNNLFGAVKFYRAGRGKGVKP
IIGAEVLLEGEDASAAPPRLLLLVQDRQGYLNLCELLARAWTRNVVKNLPLCTWEWLEEL
GEGLIVLSGAQAGPVGQALMRGAGAVAEALALRLADIFPRRFYLELQRAGRLDDEAHVAE
AAQLAARLQLPVVATHPIQFASADDYEAHEARVCIAEGEILANPRRVRRFTREQHFKTSE
QMQALFADLPSALANSAEIARRCNLTLVLGKPQLPDFPTPGGMPIADYFRQASHEGLDER
LLHLYPDAAERERQRPRYLERLEFELGTILNMGFPGYFLIVGDFIQWAKANACPVGPGRG
SGAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQSNRDRVIDYVKDKYG
KNAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGQTYTLAYPPEVKAEG
DKNNYALELEPVLYERVRQEDDVRTVIEMAQKLEGMTRNIGMHAGGVLIAPGKLTDFCPL
YQQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIARELIQKRHKGQEDFAFERVP
LDDARTYTLFAEGKTEAVFQFESRGMQGMLKEAKPSRLEDLIALNALYRPGPMDLIPSFV
NRKHGKEEVIYPHPLVESVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKA
EEMAEHRAIFRKGAAEKGIGEAQADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVH
YTAEFYCANMTVEMDDTDKLKVLYEDAVKHFGISFEPPNINRGNYRFEPVTDQVIRYGLG
AVKGTGQQAIEAIIAAREGRGTGPEGGICGPFKSLFDFCKRVDRARLNKRTVEALIKAGA
FDSLEPNRAALVASIDRAFDYAAAQAANANQGGLFDMMGEDAVGASSEEPPLAEAPEWGV
KERLTQEKTAVGFYLSGHLFDEVEDEVRRFVRTPIGELADSREPQVLAGIISDCRVINGQ
RGKLALFRIDDKSGAVEATADEGVIAASAQLLRDDEFVVLGGRLQLDHFSGGLRLKVNQV
WSLADARARFGKYLHVAAGAQPDVASIVRGFPPRREETGHGEALLRGLRVRLAVRCAADG
AAATAELQLGDDSRFFPCDEALAAWHAQAGPGSVSVVYGHA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtccacctgcgtctgcacaccgagttttccgtcgtcgacggcaccacccgcatc
gacgaggccgtcgggctggcggccgcggccggccagccggccatggccatcaccgatctg
aacaacctgttcggcgccgtcaagttctaccgcgccggccgcggcaagggcgtcaagccg
atcatcggcgccgaggtgctgctggagggcgaggacgccagcgcggcgccgccgcgtctg
ctgttgctggtgcaggatcggcaaggctacctgaacctgtgcgagttgctggcgcgcgcc
tggacgcgcaatgtggtcaagaatttgccgctgtgcacctgggaatggctggaggaactg
ggcgaaggcctgatcgtcctgtcgggcgcgcaggccggccccgtgggccaagcgctcatg
aggggcgcaggcgccgtggccgaggccttggcgctgcggctggcggacatctttccgcgg
cgcttctatctggagctgcagcgcgctggccgccttgatgacgaagcccacgtcgcggag
gcggcgcagctggccgcgcggctgcagctgccggtggtcgccacgcaccccatccagttc
gcctccgcggacgactacgaggcgcacgaggcgcgtgtgtgcatcgccgagggagaaatc
ctggccaacccgcgccgcgtgcgtcgcttcacgcgcgagcagcacttcaagaccagcgag
cagatgcaggccctctttgccgacctgccgtcggcgctggccaacagcgcggagatcgcg
cgccgctgcaacctgacgctggtgctgggcaagccgcagctgccggactttccgacgccc
ggcggcatgccgattgccgactacttccgtcaggcctcccatgaaggcctggacgagcgg
ctgctgcacctttacccggacgcggccgagcgcgagcggcagcgcccgcgctacctggag
cggctggaattcgagctgggaaccatcctgaacatgggctttcccggctactttttgatc
gtgggcgacttcatccaatgggccaaggccaacgcctgcccggtggggccgggccggggc
tcgggggcgggctcgctggtggcctacgcgctcaagatcaccgacctggacccgctgcag
tacaacctgctgttcgagcgttttctgaacccggaacgcgtctcgatgcccgacttcgac
atcgacttctgccagtccaaccgcgaccgggtcatcgactacgtcaaggacaagtacggc
aaaaatgccgtgagccagatcgccaccttcggcaccatggccgccaaggccgccatccgc
gacgtgggccgtgtcatggacatgagctacaccttctgcgatggcatctccaagctggtg
ccgggcaagccggggcagacctacacgctggcgtacccgcccgaggtcaaggccgagggg
gacaagaacaattacgccctggagctcgagccggtgctgtacgagcgcgtgcgccaggag
gacgatgtgcgcaccgtcatcgaaatggcgcaaaagctcgaaggcatgacgcgcaacatc
ggcatgcacgccggcggcgtgctgatcgcgccgggcaagctgaccgatttctgcccgctg
taccagcagcccggcagcgagtcggccgtaagccagtacgacaaggacgacgtggaggcc
atcggcctggtcaagtttgacttcctgggtctggccacgctgaccatcctggagatcgcg
cgcgagctgatccagaagcgccacaagggccaggaggactttgccttcgagcgggtgccg
ctggacgacgcgcgcacctacacgctgttcgccgagggcaagaccgaggccgtgttccag
ttcgaaagccgcggcatgcagggcatgctgaaagaggccaagccgagccggctggaagat
ctgatcgccctgaacgcgctgtaccggccgggccccatggacctgattcccagcttcgtg
aaccgcaagcacggcaaggaggaggtgatctacccgcaccccttggtcgagtcggtgctg
gccgaaacctacggcatcatggtctaccaggagcaggtcatgcagaccgcccaggtgctg
ggtggctacagcctgggcggcgccgacatgctgcgccgtgccatgggcaagaaaaaggcc
gaggagatggccgagcaccgcgccatcttcagaaagggcgcggccgagaagggcatcggc
gaggcccaggccgacgaggtcttcgacctgatggagaagttcgccggctacggcttcaac
aagtcgcacgccgccgcctactcgctgctggcctaccacacgggctggctcaaggtgcac
tacacggccgagttctactgcgccaacatgaccgtggaaatggacgacacggacaagctc
aaggtgctgtacgaggatgccgtgaagcacttcggcatcagcttcgagccgcccaacatc
aaccgcggcaactaccgcttcgagccggtgacggatcaggtgatccgctacggcctgggc
gccgtcaagggcacgggccagcaggccatcgaggccatcatcgccgcgcgcgagggccgc
ggcacgggccccgaggggggcatctgcggcccgttcaagagtctgttcgatttctgcaag
cgcgtggaccgcgcacgcttgaacaagcgcaccgtggaggccctcatcaaggccggcgcc
ttcgacagcctggagcccaaccgcgccgcgctggtcgcttccatagaccgcgccttcgac
tacgcggcagcccaggcggccaacgccaaccagggcggcctgttcgacatgatgggcgag
gacgccgtcggcgccagcagcgaggagccgccgctggccgaggcgcccgagtggggcgtc
aaggagcggctgacgcaggaaaagaccgccgtgggcttttacctgtcgggccacctgttc
gacgaagtcgaggacgaggtgcgccgcttcgtgcgcacacccatcggcgagctggctgac
agtcgagagccgcaggtgctggccggcatcatcagcgactgccgcgtcatcaacggccag
cgcggcaagctggcgctgttcagaatcgacgacaaatcaggcgccgtcgaggccacggcc
gatgagggcgtgatcgccgccagcgcgcagctgttgcgcgacgacgaattcgtggtgctg
ggcgggcggctgcagctggaccatttcagcggcggcctgcgcctgaaggtgaaccaggtc
tggagcctggccgacgcgcgcgcgcgctttggcaagtatttgcacgtggccgccggcgcg
cagccggacgtggcgtccatcgtgcgcggcttcccgccgcggcgcgaggagaccgggcac
ggcgaggcgctactgcgcggcctgcgagtgcgcctggccgtgcgctgcgcggccgacggc
gcggccgccacggccgagttgcaactgggcgacgacagccgcttcttcccctgcgacgag
gcactcgccgcctggcacgcgcaggctggtccgggcagcgtcagcgtggtctacgggcac
gcctga
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