Melaminivora suipulveris: C6568_04335
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Entry
C6568_04335 CDS
T05358
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mela
Melaminivora suipulveris
Pathway
mela03410
Base excision repair
mela03430
Mismatch repair
mela03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mela00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6568_04335 (recJ)
03430 Mismatch repair
C6568_04335 (recJ)
03440 Homologous recombination
C6568_04335 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mela03400
]
C6568_04335 (recJ)
DNA repair and recombination proteins [BR:
mela03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C6568_04335 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C6568_04335 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C6568_04335 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AVO48582
UniProt:
A0A2R3Q9W5
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Position
917986..919701
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AA seq
571 aa
AA seq
DB search
MKIIVREVHPRAAWALEQTGIHPLLARLYAARGVRSKEELDDGLGQLLRPQQMRGIDTAA
RVLADAMAQNQRLMVVADYDCDGATACAVAVRGLQLLGARHVEYLVPDRVVDGYGLTPPI
ARRVHERGADVLITVDNGIASCAGVAEARALGLTVVVTDHHLPGPELPEADAIVNPNQPG
CEFESKSMAGVGVMFYVLLALRAELRARGVFDAASQPRLEPLLPLVALGTVADVVKLDGN
NRRLVAQGLKRIRAGQMQPGIRALFDAAGRRPDAATTFDFGFALGPRINAAGRLADMTLG
IECLLTEDGSRAGELARQLDAINRERRELEGGMREQALLLAEELFEDGDEPPPAISVFDA
DFHEGVVGIVASRLKDRHHRPTFVFAASSAPGKEHELKGSGRSIPGFHLRDALDLVAKRH
PGVLLKFGGHAMAAGCTVAEEHFEIFEQAFAQVAHEWLDAATLTRRLETDGPLAPEWRRP
DLVDALAREVWGQGFAPPTFSEKVAVLNQRLVGEGGKHLSLKLLHQGQPVDAIWFGRTDP
LPGEALLAFRLDINEWRGERRVQFVVEGAED
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatagtaagagaagtgcatccccgcgccgcctgggcgctggagcagaccggc
atccacccgctgctggcgcgcctgtacgccgcgcgcggcgtgcgcagcaaggaagaactc
gacgacggcctgggccaattgctgcgcccgcagcagatgcgcggcatcgacacggcggcg
cgcgtgttggccgacgccatggcgcagaaccaaaggctcatggtcgtggccgactatgac
tgcgatggcgccaccgcctgcgccgtcgccgtgcgcggcctgcagttgctgggcgcgcgc
cacgtcgaatacctggtgccggaccgcgtggtcgacggctacggcctcaccccgccgatc
gcccgccgcgtgcacgagcgcggcgccgacgtgctgatcaccgtggacaacggcatcgcc
agttgcgccggcgtggccgaggcccgcgcgctgggcctcacggtcgtcgtgaccgaccac
cacctgcccggccccgagctgcccgaggccgacgccatcgtcaaccccaaccagcccggc
tgcgaattcgagagcaaaagcatggcgggagtgggcgtcatgttctacgtgctgctggcg
ctgcgcgccgagctgcgcgcgcgcggggtgttcgatgccgccagccagccgcggctggag
ccgctcctgcccctggtcgccctgggcacggtggccgacgtggtgaagctggacggcaac
aaccgccgcctggtggcgcagggcctgaagcgcatccgcgccggccagatgcagccgggc
atccgcgcgctgttcgacgccgccgggcgcaggcccgacgccgccaccaccttcgacttc
ggtttcgccctggggccacgaatcaacgccgcgggccgcctggccgacatgacgctgggc
atcgaatgcctgctgaccgaggacggaagccgcgccggcgaactggcgcgccagctggac
gccatcaaccgcgagcggcgcgagctggagggcggcatgcgcgagcaggcgctgctgctg
gccgaggaactcttcgaagacggcgacgagccgccgccggccatcagcgtgttcgacgcg
gactttcacgaaggcgtggtcggcatcgtcgcctcgcggctgaaggaccggcatcaccgg
ccgaccttcgtttttgccgccagcagcgcaccgggcaaggagcacgaactcaagggctcg
gggcgctccatccccggctttcacctgcgcgacgcgctggatctggtggccaagcgccat
cccggcgtgctgctgaaattcggcggccacgccatggccgccggctgcaccgtggccgag
gagcacttcgagatcttcgagcaggccttcgcccaggtggcgcacgagtggctcgatgcc
gccacgctcacgcgccggctggagaccgacggcccgctggcgcccgagtggcgccgcccg
gacctggtggacgcgctggcgcgcgaagtctggggccagggttttgccccgcctactttc
agcgaaaaagttgccgtgctgaaccagcgcctggtgggcgaaggcggcaagcacctgtcg
ctcaagctgctgcaccagggccagccggtggacgccatctggttcggccgcacggacccg
ctgccgggcgaggcgctgctggccttccgactggacatcaacgaatggcgcggcgagcgg
cgcgtgcagttcgtggtggagggagcggaggactaa
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