Melaminivora suipulveris: C6568_07350
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Entry
C6568_07350 CDS
T05358
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mela
Melaminivora suipulveris
Pathway
mela02020
Two-component system
mela02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mela00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C6568_07350 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C6568_07350 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mela03021
]
C6568_07350 (rpoN)
Transcription machinery [BR:
mela03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6568_07350 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AVO49093
UniProt:
A0A2R3QBC6
LinkDB
All DBs
Position
complement(1549669..1551219)
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AA seq
516 aa
AA seq
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MNRPTLALRASQQLALTPQLQQSIRLLQLSTLELASEVEQMLADNPFLEQDEDDGDAPGP
HAAQPAGTPAADAGPEGDAGAAHDGAAEPAEASELLGAAEPLEWEGEGAGDSDWGHDAPG
RSGSSGDGEGELDALELASHHETLAEHLTRQALSLHLAPEDAAALALLIGSLNDDGYLMD
APAELADALLGDGAWDPERHAELLHRLTVALGLLQSMEPAGVGARDLAECLALQLRARQA
LGQDDAELTRVALAVCRQPLDWLARRDVRRLSHACSADEEATRAAIALIARLEPKPGRRF
ADVRRMAVVPDVIVKRGGSGAQQRFAVQLNPAVMPRLRVHELYAGALRTHRGGEGHPQLQ
ARLQEARWFIKNVQQRFDTILRVSDAIVQRQKNFFVHGELAMRPLVLRDIAEELGLHEST
ISRVTTAKYMATPQGTYELKYFFGSGLGTETGGNASSTAVRALIRQFVAAEDPAKPLSDS
KIADLLKEQGIECARRTVAKYREALRIAPANLRKTL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcccgacgctggcgctgcgcgcctcgcagcagctcgccctgacgccgcagctg
cagcagtccatccggctgctgcagctgtcgacgctggagctggcgagcgaggtcgagcag
atgctggccgacaaccccttcctggagcaggacgaggacgacggtgacgcgcccggcccg
cacgccgcgcagccagccggcacgcccgccgccgacgcaggccccgagggcgacgcgggg
gccgcgcacgacggcgccgccgagccggccgaagcctccgagctgctgggcgccgctgaa
cccctggagtgggagggcgaaggcgccggtgacagcgactggggccacgacgcgcccggc
cgctcgggcagcagcggcgacggcgagggcgaactcgacgcgctggagctggccagccac
cacgaaacactggccgagcacctcacgcgccaggcgctgtccctgcacctggcgccggag
gacgccgcggcgctggcgctgctgatcggctcgctgaacgatgacggctacctgatggac
gccccggccgagctggccgacgcgctgctgggcgacggcgcctgggaccccgagcgccac
gccgagctgctgcaccgcctgaccgtggccctgggtctgctgcaaagcatggagccggcg
ggcgtgggcgcgcgcgacctggccgagtgcctggcgctgcagctgcgcgcgcgccaggca
ctcggccaggacgatgctgaactcacgcgcgtggcgctggccgtttgccgccagccgctg
gactggctggcccggcgcgacgtgcgccgcctgtcgcacgcctgctcggccgatgaagag
gcgacgcgcgccgccatcgcgctgatcgcgcggctggagcccaagccgggccggcgcttt
gccgacgtgcgccgcatggcggtggtgcccgacgtgatcgtcaagcgcggcggcagcggc
gcgcagcagcgctttgccgtgcagttgaacccggccgtcatgccgcgcctgcgtgtgcat
gagctgtacgccggcgcgctgcgcacgcaccgcggcggcgagggtcacccgcaactgcag
gcgcggctgcaggaggcgcgctggttcatcaagaacgtgcagcagcgcttcgacaccatc
ctgcgcgtctcggacgccatcgtgcagcggcagaagaattttttcgtgcacggcgaactg
gccatgcgcccgctggtgctgcgcgacatcgccgaggagctgggtctgcacgaatcgacc
atctcgcgcgtgaccacggccaagtacatggccacgccgcagggcacctacgagctcaag
tattttttcggctcgggcctgggcacagagaccggcggcaacgcgtcgagcacggcggtg
cgcgcgctgatccgccagttcgtcgccgccgaggacccggccaaacccctgtcggacagc
aagatcgccgacctgctcaaggagcagggcatcgagtgcgcgcgccgcacggtggccaag
taccgcgaggcgctcaggatcgcgcccgccaacctgcgcaagaccctctga
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