KEGG   Melaminivora suipulveris: C6568_07350
Entry
C6568_07350       CDS       T05358                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mela  Melaminivora suipulveris
Pathway
mela02020  Two-component system
mela02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mela00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C6568_07350 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    C6568_07350 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mela03021]
    C6568_07350 (rpoN)
Transcription machinery [BR:mela03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C6568_07350 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR
Other DBs
NCBI-ProteinID: AVO49093
UniProt: A0A2R3QBC6
LinkDB
Position
complement(1549669..1551219)
AA seq 516 aa
MNRPTLALRASQQLALTPQLQQSIRLLQLSTLELASEVEQMLADNPFLEQDEDDGDAPGP
HAAQPAGTPAADAGPEGDAGAAHDGAAEPAEASELLGAAEPLEWEGEGAGDSDWGHDAPG
RSGSSGDGEGELDALELASHHETLAEHLTRQALSLHLAPEDAAALALLIGSLNDDGYLMD
APAELADALLGDGAWDPERHAELLHRLTVALGLLQSMEPAGVGARDLAECLALQLRARQA
LGQDDAELTRVALAVCRQPLDWLARRDVRRLSHACSADEEATRAAIALIARLEPKPGRRF
ADVRRMAVVPDVIVKRGGSGAQQRFAVQLNPAVMPRLRVHELYAGALRTHRGGEGHPQLQ
ARLQEARWFIKNVQQRFDTILRVSDAIVQRQKNFFVHGELAMRPLVLRDIAEELGLHEST
ISRVTTAKYMATPQGTYELKYFFGSGLGTETGGNASSTAVRALIRQFVAAEDPAKPLSDS
KIADLLKEQGIECARRTVAKYREALRIAPANLRKTL
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgaaccgcccgacgctggcgctgcgcgcctcgcagcagctcgccctgacgccgcagctg
cagcagtccatccggctgctgcagctgtcgacgctggagctggcgagcgaggtcgagcag
atgctggccgacaaccccttcctggagcaggacgaggacgacggtgacgcgcccggcccg
cacgccgcgcagccagccggcacgcccgccgccgacgcaggccccgagggcgacgcgggg
gccgcgcacgacggcgccgccgagccggccgaagcctccgagctgctgggcgccgctgaa
cccctggagtgggagggcgaaggcgccggtgacagcgactggggccacgacgcgcccggc
cgctcgggcagcagcggcgacggcgagggcgaactcgacgcgctggagctggccagccac
cacgaaacactggccgagcacctcacgcgccaggcgctgtccctgcacctggcgccggag
gacgccgcggcgctggcgctgctgatcggctcgctgaacgatgacggctacctgatggac
gccccggccgagctggccgacgcgctgctgggcgacggcgcctgggaccccgagcgccac
gccgagctgctgcaccgcctgaccgtggccctgggtctgctgcaaagcatggagccggcg
ggcgtgggcgcgcgcgacctggccgagtgcctggcgctgcagctgcgcgcgcgccaggca
ctcggccaggacgatgctgaactcacgcgcgtggcgctggccgtttgccgccagccgctg
gactggctggcccggcgcgacgtgcgccgcctgtcgcacgcctgctcggccgatgaagag
gcgacgcgcgccgccatcgcgctgatcgcgcggctggagcccaagccgggccggcgcttt
gccgacgtgcgccgcatggcggtggtgcccgacgtgatcgtcaagcgcggcggcagcggc
gcgcagcagcgctttgccgtgcagttgaacccggccgtcatgccgcgcctgcgtgtgcat
gagctgtacgccggcgcgctgcgcacgcaccgcggcggcgagggtcacccgcaactgcag
gcgcggctgcaggaggcgcgctggttcatcaagaacgtgcagcagcgcttcgacaccatc
ctgcgcgtctcggacgccatcgtgcagcggcagaagaattttttcgtgcacggcgaactg
gccatgcgcccgctggtgctgcgcgacatcgccgaggagctgggtctgcacgaatcgacc
atctcgcgcgtgaccacggccaagtacatggccacgccgcagggcacctacgagctcaag
tattttttcggctcgggcctgggcacagagaccggcggcaacgcgtcgagcacggcggtg
cgcgcgctgatccgccagttcgtcgccgccgaggacccggccaaacccctgtcggacagc
aagatcgccgacctgctcaaggagcagggcatcgagtgcgcgcgccgcacggtggccaag
taccgcgaggcgctcaggatcgcgcccgccaacctgcgcaagaccctctga

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