Melaminivora suipulveris: C6568_10595
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Entry
C6568_10595 CDS
T05358
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mela
Melaminivora suipulveris
Pathway
mela03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mela00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C6568_10595 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mela03021
]
C6568_10595 (rpoC)
03400 DNA repair and recombination proteins [BR:
mela03400
]
C6568_10595 (rpoC)
Enzymes [BR:
mela01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C6568_10595 (rpoC)
Transcription machinery [BR:
mela03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C6568_10595 (rpoC)
DNA repair and recombination proteins [BR:
mela03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C6568_10595 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AVO49661
UniProt:
A0A2R3QD07
LinkDB
All DBs
Position
2235949..2240178
Genome browser
AA seq
1409 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDEYDKQRVEHGDEFVARM
GAEGIKELLEGIDLEVEIERLRGDLTGSEVKVKKNTKRLKVLEAFRKSGIKPEWMILQVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIREHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYHATREKINGKGEGMVFTDILEVQRALDAGEV
ELATKISVRLVEWSRDKDSGEWQSATSLVETTVGRALLSEILPKGLAFSNLNKALKKKEI
SKLINASFRKCGLKETVVFADKLLQNGFRLATHAGISIAIDDMLVPPQKVDILARAEGEV
KEIEQQYVSGLVTAGERYNKVVDIWGKAGDEVSKVMMAQLAKEKTTDRHGKEVEQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTTHGSLMRAIVEGGEVIESLRERVLG
RVAAEEVLHPETREVLAPAGTLLGEDMLDELEAAGVDEVKVRTALTCETRYGLCASCYGR
DLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGIIGFN
ATMRYVTNTRGELVVIARSGEIIIQDEHGRERERHKVPYGATLTVKADQQVKAGTILANW
DPLTRPIITEFAGQVKFENIEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPLVKLI
DAEGKEVKIPGTDHSVAIGFQIGALIQVRDGQDVGPGEVLARIPMEGQKTRDITGGLPRV
AELFEARSPKDKGMLAEMTGTISFGKETKGKVRLQITDPEGHVWDELVPKEKNVLVHEGQ
VVNKGELVVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVDNPGESSYIAGEQVERSEILNTNEQLQKDGKIPATYTNVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARRAKDAMDEAERRA
IAEAEAAELAEAGEIEAAAHVEGDAGAVD
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaagcaattcacgccggatgagcatttcgatgccatc
aagatcggcatggcttcgcccgagaagatccgctcctggtccttcggcgaggtgaaaaag
cccgagaccatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgcgccaag
atcttcgggcccatcaaggactacgagtgcctgtgtggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgaaaagtgcggcgttgaagtcacccagaccaaggtgcgccgcgac
cgcatgggccacatcgacctggccgcgccctgcgcccacatctggttcctgaagagcctg
ccctcgcgcctgggcctggtgctggacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctacgtggtcaccgacccgggcatgacgccgctcaagaagttctccatcatg
agcgaggacgagtacgacaagcagcgcgtcgagcacggggatgagttcgtcgcgcgcatg
ggcgccgagggcatcaaggagctgctggaaggcatcgacctggaagtcgagatcgagcgc
ctgcgcggcgatctgacgggctccgaagtcaaggtcaagaagaacaccaagcgcctgaag
gtgcttgaggccttccgcaagtcgggcatcaagccggagtggatgattttgcaggtgctg
ccggtgctgccgccggacctgcgcccgctggtgccgctggatggcgggcgctttgccacg
tccgacctgaacgacctgtaccgccgcgtcatcaaccgcaactcgcgcctgcgccgcctg
ctggagctgaaggctccggaaatcatcgcgcgcaacgaaaagcgcatgctgcaggaagcc
gtggacagcctgctggacaacggccgccgcggcaaggccatgacgggcgccaacaagcgt
gccctgaagtccctggccgacatgatcaagggcaagggcggccgttttcgccagaacctg
ctgggcaagcgcgtcgactattcgggccgctcggtcatcaccgtgggccctacgctcaag
ctgcaccagtgcggtctgccgaagctgatggcgcttgaattgttcaagcccttcatcttc
tcgcgcctggaagccatgggcatcgccacgaccatcaaggccgcgaagaaggaagtggaa
gctggcacgccggtggtgtgggacatcctggaagaggtcatccgcgaacatccggtgatg
ctgaaccgcgcgcccacgctgcaccgcctgggcatccaggcgttcgagcccatcctgatc
gaaggcaaggccatccagctgcacccgctggtttgcgccgccttcaacgccgacttcgac
ggcgaccagatggccgtgcacgtgccgctgtcggtggaggcgcagctcgaagcgcgcacg
ctgatgctggcctccaacaacgtgctgttccccgcctcgggcgagccctccatcgtgccc
tcgcaggacgtggtgctgggcctgtaccacgccacccgcgagaagatcaacggcaagggc
gaaggcatggtcttcaccgacatcctcgaagtccagcgcgcgctggacgcgggcgaggtc
gagctggccaccaagatcagcgtgcgcctggtcgagtggagccgtgacaaggacagcggc
gaatggcagagcgccaccagcctggttgagaccacggtcggccgcgcgctgctgtcggaa
atcctgcccaagggcctggcgttttccaacctgaacaaggcgttgaagaagaaggagatc
tccaagctcatcaatgcctcgttccgcaagtgcggcctgaaggaaaccgtggtgttcgcc
gacaagctgctgcaaaacggcttccgtctggccacgcatgcgggcatttccatcgccatc
gatgacatgctggtgccgccgcaaaaggtggacatcctggcgcgtgccgagggcgaggtc
aaagagatcgagcagcagtacgtctcgggtctggtcacggccggcgagcgctacaacaag
gtggtggacatctggggcaaggccggcgacgaagtctccaaggtcatgatggcccagctg
gccaaggaaaagaccaccgaccgccacggcaaggaggtcgagcaggagtcgttcaactcc
atctacatgatggccgattccggcgcgcggggctccgcggcgcagatccgccagctggcc
ggcatgcgcggcctgatggccaagcctgacggctccatcatcgagacgcccatcaccgcg
aacttccgcgaggggctgaacgtgctgcagtacttcatctccacgcacggcgcgcgcaag
ggcctggcggacacggcgctcaagaccgccaactccggctacctgacgcgccgcctggtg
gacgtgacgcaggacctggtggtgaccgaggacgactgcggcacgacgcatggctcgctg
atgcgcgccatcgtcgagggcggtgaagtcatcgaatcgctgcgcgagcgcgtgctgggc
cgtgtggccgccgaagaggtgctgcaccccgagacccgcgaagtgctggcccccgccggc
acgctgctgggcgaggacatgctcgacgagctggaagctgccggcgtggacgaagtcaag
gtgcgcactgcgctgacctgcgagacgcgttacggcctgtgcgccagctgctacggccgc
gacctgggccgtggcggcctgatcaacctcggcgaggccgtgggcgtgatcgccgcgcaa
tccatcggcgagcccggcacgcagctgaccatgcgcaccttccacatcggtggtgcggcg
tcgcgcgcggcggtggcctccagcgtggaagccaagtccaacggcatcatcggcttcaac
gccacgatgcgctacgtgaccaacacccgcggcgaactggtggtgatcgcccgctccggc
gagatcatcatccaggacgagcacggccgcgagcgcgagcgccacaaggtgccgtatggc
gccacgctgacggtgaaggccgaccagcaggtcaaggccggcaccatcctggccaactgg
gatccgctgacgcgcccgatcatcacggagttcgccggccaggtgaagttcgagaacatc
gaggaaggcctgaccgtggccaagcaggtggacgaggtcaccggcctgtccacgctggtg
gtcatcgaccccaagcgccgcggttcggccaaggtggtgcgtcctctggtcaagctgatc
gacgccgagggcaaggaggtgaagatccccggtaccgaccactcggtggccatcggcttc
cagatcggcgcgctgatccaggtgcgcgacggccaggacgtgggccccggcgaagtgctg
gcccgcatccccatggaaggccagaagacccgcgacatcaccggcggtctgccacgcgtg
gccgagctgttcgaggcccgctcgccaaaggacaagggcatgctggccgagatgaccggc
acgatctcgttcggcaaggagaccaagggcaaggtgcgcctgcagatcaccgaccccgag
ggccatgtctgggacgagctggtgcccaaggaaaagaacgtgctggtgcacgagggccag
gtggtcaacaagggcgagctggtcgtggacggcccggccgatccgcaggacatcctgcgc
ctgctgggcatcgaggagctgtcgcgctacatcgtcgatgaagtgcaggacgtctaccgc
ctgcagggggtgaagatcaacgacaagcacattgaggtcatcgtgcgccagatgctgcgc
cgcgtcgtggtcgacaaccccggcgagtccagctacatcgccggtgagcaggtcgagcgc
tcggagattctcaacaccaacgagcagctgcaaaaggacggcaagatcccggcgacctac
accaacgtgctgctgggcatcaccaaggcgtcgctgtccaccgactcgttcatctccgca
gcgtcgttccaggagacgacgcgcgtgctgaccgaggcggccatcatgggcaagcgcgac
gagctgcgaggcctgaaggaaaacgtcatcgttggccgcctgatcccggccggcacgggc
ctggcctaccaccaggcgcgccgcgccaaggacgccatggacgaggccgagcgccgggcc
atcgccgaggccgaggcggcagaactggctgaagccggcgagatcgaggctgccgcgcat
gtcgaaggcgatgccggcgctgtcgactga
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integrated database retrieval system
