Melaminivora suipulveris: C6568_17520
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Entry
C6568_17520 CDS
T05358
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mela
Melaminivora suipulveris
Pathway
mela03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mela00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6568_17520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mela03019
]
C6568_17520
Enzymes [BR:
mela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C6568_17520
Messenger RNA biogenesis [BR:
mela03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C6568_17520
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Fe-ADH
AAA_22
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AVO50824
UniProt:
A0A2R3QGH1
LinkDB
All DBs
Position
complement(3701328..3703073)
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AA seq
581 aa
AA seq
DB search
MTFDDLNLAPAILRAVQEQGYDSPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPLL
QRLSEGEGATSKFGNRGVRALVLTPTRELAAQVEESVRGYGKHLDVKSTVIFGGVGMNPQ
IERIKRGVDILVATPGRLLDLQQQGFLDLSTVQILVLDEADRMLDMGFIHDVKKILALLP
ASKQSLLFSATFSDEIRELAGNLLKDPQSIQVTPRNTTVQRISQVIHPVGRAKKKQVLLH
IIQEHDWSQVLVFTRTKFGANNVADYLTKNGVTAMALHGNKSQSARTQALEGFKTGQIRA
LVATDIAARGIDIDDLPHVVNYEIPNVSEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMM
EIERFTKQEIPVQVIDGFGPDEGEQAEPIAMGRQTIWGGAGRPPSREVMQAAAKAARQEM
MERIRTNKGAQGGGQRGRQAASEGGQPRKEGVEGGGSRGRNNGGHGAGRSGARPPQAQQQ
PGNGGARRRSGGGGAGGGSRGMGEGSPRRHDDSQPRSENAHMLTQTGHSLMPRRPGGGGQ
PDPMRTSVDMMAGSGRRGGGGYRGGSGGGGGRGPRGGGFGR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgacgatctgaatctcgcacccgccatcttgcgcgccgtgcaggaacagggc
tatgacagccccacccccatccaggcccaggccattcccgccgtgctcgcaggacacgac
ctgctggccggcgcgcagaccggcaccggcaagaccgccgccttcacgctgccgctgctg
cagcgcctgagcgagggcgagggcgccacctccaagttcggcaatcgcggcgtgcgcgcc
ctggtgctgacccccacgcgcgaactcgccgcgcaggtcgaggaatcggtgcgcggctac
ggcaagcacctcgacgtcaagtccaccgtgatcttcggcggcgtcggcatgaacccgcag
atcgagcgcatcaagcgcggcgtggacatcctggtggccacccccggccgcctgctggac
ctgcagcagcagggcttcctggacctgtccacggtccagatcctggtgctggacgaggcc
gaccgcatgctggacatgggcttcattcacgacgtgaagaagatcctcgccctgctgccg
gcctccaagcagagcctgctgttttccgccaccttcagcgacgagatccgcgagctggcc
ggcaatctgctcaaagacccgcaaagcatccaggtcacgccgcgcaacaccacggtgcag
cgcatcagccaggtcatccatccggtgggccgggccaagaaaaagcaggtgctgctgcac
atcatccaggagcacgactggagccaggtgctggtcttcacgcgcaccaagttcggcgcc
aacaacgtggccgattacctcaccaagaacggcgtcacggccatggcgctgcacggcaac
aagagccagagcgcccgcacgcaggcgctggagggcttcaagaccggacagatccgcgcc
ctggtggccactgacatcgccgcccgcggcatcgatatcgacgacctgccgcacgtcgtg
aactacgagatccccaacgtctccgaggactacgtgcaccgcatcggccgcaccggccgc
gccgggcgcgaaggccatgccgtcagcctggtctgcatggacgaggaaggcttcatgatg
gagatcgagcgcttcaccaagcaggagatcccggtgcaggtcatcgacggcttcggcccc
gacgagggcgagcaggccgagcccatcgccatgggccgccagaccatctggggcggcgcc
ggccgcccgcccagccgcgaagtcatgcaggctgcggccaaggctgcgcgccaggagatg
atggagcgcatccgcaccaacaagggggcgcaaggcggcggccagcgcggccgccaggcc
gcttcggagggcggccagccgcgcaaggaaggcgttgaaggcggcggcagccgcggccgc
aacaatggcggccacggcgccggccgctccggcgcgcggccccctcaggcccagcagcag
cccggcaacggcggcgcgcgccgacgcagcggcggtggcggcgctggcggcggcagccgc
ggcatgggcgaaggcagcccgcgccgccacgacgacagccagccgcgcagcgagaacgcc
cacatgctgacgcagaccggccattccctgatgccgcgtcgtcccggcggcggcggccag
cccgatccgatgcgcaccagcgtggacatgatggctggcagcggccgtcgcggcggcggc
ggctatcgcggcggcagcggtggcggcggcgggcgcggcccgcgcggcggcggcttcggc
cgctga
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