KEGG   Methylomonas sp. LL1: IVG45_03800
Entry
IVG45_03800       CDS       T07814                                 
Symbol
traD
Name
(GenBank) conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
mell  Methylomonas sp. LL1
Brite
KEGG Orthology (KO) [BR:mell00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mell02044]
    IVG45_03800 (traD)
Secretion system [BR:mell02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   IVG45_03800 (traD)
SSDB
Motif
Pfam: TrwB_AAD_bind TraG-D_C AAA_10 DUF87 T4SS-DNA_transf FtsK_SpoIIIE HerA_C AAA_22 Zeta_toxin AAA_29 AAA_30 nSTAND3
Other DBs
NCBI-ProteinID: QPK64107
LinkDB
Position
complement(702334..704166)
AA seq 610 aa
MKSDYDYQFPWRPIFEVYAISGWLGGAGLAYWTSRWSGLPREPFDWLMTACGVMACWRLS
PALNLWYRKRLLRQFRFQYLDAEKLVAMVKQHPEALWFGWGFDWVQKHAQLAYEILKRDV
STLIPSDHQRMGSAWIHGLEVSESDIRQPLQHTAGHTLLVGTTGAGKTRAFDVLVTQAVL
RGEAVIIIDPKGDKDLMASAKRACALAKRPDRFVYFHPAFPEDSVRLDPLHNFNRPSEIA
SRISAISPSESSNDPFKAFGQKSLDNVIQGLMVIEERPTLVKLRRYLEGGPSTLVIQALE
RYFDNNLGHWRQEARPYLKNAKDIDSKAVGLVRFYREVVQYQLPNLDLEGLLSLFEHDRA
HFSKMVASLIPIMNMLTSGSLGPLLSPNPHDIDDLRPITNTGHIIEKAQVAYIGLDSLSD
GMVGSAIGSILLADLAAVAGDRYNYGVTDRPVNVFVDEAAEVINDPFIQVLNKGRGAKIR
LFIATQTFADFAARTGSQDKARQVLGNVNNLIALRIMDSETQQYITDNLPKTRLKYIMRT
QGVATSATNPTVFSGNVGERLMEEEGDLFAPQLLGQLPDLHYIAKLSGGRIVKGRLPILR
SAEDRQGASS
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgaaatccgattacgattaccagtttccctggcggccgatcttcgaggtgtatgccatc
tcgggttggttgggcggtgccggattggcatattggactagtcgttggtcgggcttgccg
cgtgagcccttcgattggttgatgacggcgtgcggcgtgatggcgtgttggcggttgtcg
ccggcgttgaatctttggtaccgcaaacgcctgttgcggcagtttcggttccaatacctg
gatgccgagaagctggtagcgatggtgaaacagcatcccgaagccttgtggttcggctgg
ggattcgattgggtgcaaaagcacgcgcaattggcctacgagattttgaaacgcgatgtc
tcgactttgatacctagcgatcatcaacgcatgggctcggcctggatacacggcctggaa
gtctccgaaagcgatatccgccagcctttgcagcataccgccggccatacgctgctggtc
ggtactaccggcgccggcaaaactcgcgcctttgacgtgttggtgacgcaagccgtgttg
cgcggcgaagcggtgatcatcatcgatcctaaaggcgacaaagatttgatggcctctgcc
aaacgggcttgcgccttggccaagcgaccggatcgtttcgtgtatttccacccggcgttt
ccggaagacagcgtccgactcgatcccttgcacaatttcaaccgaccttcggaaatcgcc
agccgtatcagcgccatttcgcccagcgaaagcagtaacgatccgttcaaagcctttggc
caaaaatcgttggataacgtgattcagggtttgatggtgattgaggagcgccctaccctg
gttaagctgcgccgttatctggaaggcggcccttcgacgttggtgattcaggccctggaa
cgctatttcgacaacaatctggggcattggcggcaagaggcgcggccttacctgaaaaac
gccaaggacatcgattccaaagcggtaggtttggttcggttttatcgggaggtcgtgcag
taccaactgcccaatttggatttggaaggcctattgtccttgttcgaacacgaccgggcg
cacttcagcaagatggtcgcctccttgattccgatcatgaacatgctgacctcgggctct
ttaggccccctgctctcccctaaccctcatgatattgacgatcttaggccgatcaccaat
accggccacatcattgaaaaagcccaggtcgcttatatcggtctggactcgttatcggat
ggcatggtgggcagcgccattggctcgattctgttggccgatttggcggccgtagccggt
gatcgctacaactacggcgtcacggaccgaccggtgaatgtgtttgtcgacgaggcggcc
gaagtcattaacgaccccttcattcaggtgttgaacaaaggccgcggtgccaagattcgc
ctgttcatcgccacccagacctttgccgattttgccgcccgtaccggttcccaggacaaa
gcccggcaagtgctgggtaacgtcaacaacctgatcgcgctgaggatcatggacagcgag
acccagcagtacatcaccgacaatctgccaaaaacccgcttgaaatacatcatgcgcacc
caaggcgtagccactagcgcgactaatcctacggtgttttccggcaatgtcggcgaacgg
ctaatggaagaagaaggtgatttgtttgccccgcagttactcggacaactgcctgacttg
cattacatcgccaagttatccggcggccggattgtcaaagggcgtttgccgatactgcgt
tcggccgaagatcgtcagggcgcgagctcatga

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