Methylomonas sp. LL1: IVG45_07260
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Entry
IVG45_07260 CDS
T07814
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IVG45_07260 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mell03400
]
IVG45_07260 (recC)
Enzymes [BR:
mell01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IVG45_07260 (recC)
DNA repair and recombination proteins [BR:
mell03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IVG45_07260 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TarS_linker
Motif
Other DBs
NCBI-ProteinID:
QPK64739
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All DBs
Position
1496394..1499879
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AA seq
1161 aa
AA seq
DB search
MTSAHSAPLDKGIAVIHSNQLEALRDVVEYWLRQHPLAPLENEMFLVQSNGMGQWLKQSL
AQNSALGIAAALQIQLPSLFIWSVYRAVLGQQIPKEQPLAKAPLTWRLYRLLPALIGQPG
FENLAHFLHQDLNTRKRYQLAEQLADLFDQYQVYRSDWIGDWAAGRDLLRNAHGEAKPLP
EMQQWQAVLWRAVLNDLGADYNPFASRASVHAQFMAGIDDLDQRPAGIPRRIMLFGLSSL
PQQSLEVLAKIGKFCQIVLFVHNPCQHYWADIIEDKELLKAQRRRQSHKPGMAASLNPEE
LHLHANPLLAAWGKQGRDYIRLLDHFDETQAYADWHWPDQKIDLFKDYGEAGNRGLLQQL
QQTILDLEPAPDQAIELDILDDSLAFHIAHSPQREVEILHDQLLARFNAAQQAGDPLYPR
DVIVMVPDINQYAPHIRAVFGQVQAGDPRYIPFSLADQQQRGENPLLVAVEALLNLPDSR
FSVSEFLGLLEVPALRLRFGMEPTAIPRLHQWLEQAGIRWGLNAEQRVRTVEMPADFAAN
TWQFGLRRMLLGYAVGAGDAFYGIEPYPEIGGLEAQWLGNLCHLLDTLERYANQLSRDQS
AETWLQSLTQLLEDFFIADTDRDRKTLETLARALTTWHQACVQGGLGADDRLPLNVVREA
WLAAVDEPNLQQRFLGGRVNFCTLMPMRAIPFKLICLLGMNDGDYPRSQYPHGFDLMNQR
GQYRPGDRSRRQDDQYLFLEALLSARQQLYISWIGRSIRDNSERPPSVLIAQLRDFIEQS
WCLAGEAKLLDALTLEHPLQPFSPAYIKQDRDPRLFTYAGEWFEAAAIEPATQPEIVGTE
EQAYNLNPEALARFLRAPVKTYCQHSLKFSFDSEDVTSEDNEPFGFDRLEAHLYSQALLD
GLRNQQPADVEDFFHRQMTALAGQGKLPLGGFAQTAFAGIAVPADQAWRQYQSLLEAWPQ
ELQPLHVELIFNLAGAVDVQFSAGLNHLRRAENHENLALVSLTAQNLLKKDAVQYQNLLL
PWLQHLAACADGMPLQSFIAGADGVIEIQPLAQAKALAYLQTLVEAWQRGLQTPLPVACR
TAFAWLNANEEKALETAQSQYDGDDWNSGEVDYDAYLARFYPSFDSLYQTSNADFETWAD
RLYRPIYLNLKRHSASLENAS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcccattccgccccgctggataaaggcattgccgtgattcattccaaccaa
ctggaagccttgcgggatgtggtggaatactggctgcgccaacacccattggcgccgctg
gaaaacgagatgtttctggtgcaaagcaacggcatgggccaatggctgaaacaaagcctt
gcgcaaaacagcgccctcggcatcgccgccgccctgcaaatccaattgccgtcactgttc
atctggagtgtataccgggcggtgttgggccaacaaattcccaaggaacaacctctggcc
aaagccccgctgacctggcgcttataccgcttgctgccggccttgatcggccaaccggga
ttcgaaaacctggcgcattttttacatcaagacctcaacactcgaaaacgctaccaattg
gccgaacaactggccgacttgttcgaccaatatcaggtgtatcgttccgactggatcggc
gactgggccgccggccgcgatctattgcgcaacgcccacggcgaagcgaagccgctgccc
gaaatgcaacagtggcaagcggttctatggcgcgcagtgctgaatgatctgggcgccgac
tacaatccgttcgccagccgggcctcggtgcatgcccaattcatggccggcattgatgat
ctggatcaacgccccgccggcatcccgcgccgcatcatgctgttcggcctgtcgtcgttg
ccgcaacaatctctggaagtgctggccaaaatcggcaagttttgccaaatcgtgctgttc
gtgcacaatccttgtcaacattactgggccgacatcatcgaagacaaggaactgttaaaa
gcccagcgccgccggcaatcccacaagcccggcatggccgccagcctaaaccccgaggaa
ttgcatctacacgccaatccgctgctggcggcctggggtaaacagggccgcgactatatc
cgcttgctggatcatttcgatgaaactcaggcctatgccgattggcattggccggatcag
aaaatcgatttgttcaaggattacggcgaagccggtaaccgaggcttattgcaacaactg
caacagactattctggatctggagccggcacccgatcaggcgattgagctggacatactc
gacgactcgctggcctttcatatcgcccacagcccgcagcgggaagtggaaatcctgcac
gatcaactgctggcccgcttcaatgccgcccagcaagccggcgacccgctctatccgcgc
gacgtgatcgtgatggtgccggacatcaaccaatacgccccgcacatccgcgccgtgttc
ggacaggtgcaagccggcgacccgcgctatattccattcagcctggccgaccaacagcaa
cgcggcgaaaatccgctgctggtggccgtggaggccttgttgaatctgccggattcgcgc
ttcagcgtcagcgaatttctgggactgctggaagtgccggccttgcggctgcgtttcggc
atggaaccaaccgctatccccaggctgcatcagtggctggaacaagccggcatccgctgg
ggcctgaatgccgagcaacgcgttcgcacggtcgagatgccggccgattttgccgccaac
acctggcaattcggcttacggcggatgttgctgggttacgccgtcggtgccggcgacgcc
ttctacggcatcgaaccatatccggaaatcggtggcctggaggctcaatggctgggcaat
ctgtgtcatttgctggacaccctggaacgctacgctaaccaactgagccgggatcaaagc
gccgaaacctggctacaaagcctgacccaactgctggaagatttttttatcgccgacacg
gaccgtgaccgtaaaaccttggaaactctagcccgagccttgaccacctggcaccaagcc
tgtgtccagggcggcctgggcgctgacgatcggttgccgttgaatgtggtacgcgaagcc
tggttggcggcggtcgatgaacccaatctgcaacaacgcttcctgggcggccgggtcaat
ttctgtaccctgatgccgatgcgggccataccgtttaagctgatttgcctgttgggcatg
aacgacggcgattatccacgcagccaatatccgcacggtttcgatttgatgaatcagcgt
ggccagtaccgccccggcgaccgctcgcgccggcaggacgatcaatatctgtttctggaa
gccctgctgtcggccaggcagcaactttacatcagctggatcggccgcagcatccgcgac
aacagcgagcggccgccgtcggtgctgatcgcccaattgcgcgattttatcgaacaaagc
tggtgtttggccggcgaggcaaaactgctggacgcgttgacgctggaacacccgctgcaa
cccttcagcccggcatacatcaagcaagaccgcgacccgcgcctgtttacctatgccggc
gaatggttcgaagcggcggcgatcgaacccgccacccaacccgaaatcgtcggcaccgag
gaacaagcctacaacctgaatcctgaagcgctggcccgttttttacgggcgccggtcaag
acctattgccagcacagcttgaaattcagcttcgacagcgaggacgtcaccagcgaagac
aacgagccgttcggtttcgatcgcctggaagcgcatctctacagtcaagccctgctggac
ggcttgcggaaccagcaaccggccgatgtcgaggatttttttcaccggcagatgacagcc
ctggccggccaaggcaaactgccgctgggcggttttgcccaaaccgcgtttgccggcatc
gccgttccggccgaccaagcttggcgtcaataccaaagcctgcttgaagcatggccacag
gaactacagccgctacatgtcgaattgatttttaatctggccggcgctgtcgatgtgcaa
ttcagcgccgggctgaaccatttacgccgagccgaaaaccatgaaaacttggccctggta
tcgctgaccgcgcaaaatctgctcaaaaaagatgcggttcaatatcagaatctattactg
ccctggctacagcatctggccgcctgcgccgacggtatgccgctacaaagcttcatcgcc
ggcgccgacggcgtgattgaaattcaaccgctggcgcaagccaaggctttggcatatttg
caaaccttggtcgaagcttggcagcggggtttgcaaaccccgctaccggttgcctgccgc
acggcgtttgcctggctgaacgccaacgaagaaaaagccctggaaaccgcgcaatcgcaa
tatgacggcgacgactggaacagcggcgaagtcgattacgatgcctatctggcgcggttt
tatcccagctttgacagtttgtatcaaaccagcaatgccgatttcgaaacctgggccgat
aggctttaccggccgatttatctcaatctcaagcgacactctgcttcgctggaaaacgca
tcatga
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