Methylomonas sp. LL1: IVG45_07265
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Entry
IVG45_07265 CDS
T07814
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IVG45_07265 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mell03400
]
IVG45_07265 (recB)
Enzymes [BR:
mell01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IVG45_07265 (recB)
DNA repair and recombination proteins [BR:
mell03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IVG45_07265 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_25
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPK64740
UniProt:
A0A7T0NZU8
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All DBs
Position
1499876..1503544
Genome browser
AA seq
1222 aa
AA seq
DB search
MTATAIDPLQFPLSGTRLIEASAGTGKTYTIAALYVRLILGHGRQGAELLPPDILVVTFT
DAATKELRERIRARLTQAAGYFREKTVENDDFLQRLRADYAAEHWPACAYRLELAANWMD
EAAVYTIHGWCNRTLQQHAFDSGSLFRQEVDSDDQELLNQVVRDYWRRFFYPLSYTACLA
VYKLAGSPDQLAKILKPLLFETEALGLECPEQDIAKVFGDWENWEIQRGNLENQARTQWL
NDQPTIETLLKDASEKGWLNGNQYRKASFNEKLKQMAAWAAGDQLDLDALAKFGQQKLQA
GLTKAHQDKAHPFEQAAFQAIDSLVEHSAEQIDIAGLISLHAIHWIRARYDSEKQRIARM
TFDDMLNRLDQALQGDNAERLATAIVKQYPMALIDEFQDTDPVQYRIFARLYPADADRDS
ACFMIGDPKQAIYSFRGGDIFTYLKAHQATLGRHYTLSTNYRSTEALVWAVNRVFEQADT
SQAEGAFCFKHDDHDPLPFIPVNAQGRHETWVIKQQSVPALTLWQLPSETPIGMPDYRRQ
MADATASEIVRLLHGAGQGQTGFQSEPGGIRPLQPADIAILVRSGTEAKVMRQALAERQL
RSVYLSERESIFASPEAADLLIWLKALAEPRDERKVRAALSSATIGWPYQTLRQLTLDEA
AWEQQLERFIAYQQRWQQDGILPTLRQLMSDYALPARLQTAADGERRLTNLLHLAELLQQ
ASSHLEGEQALIRHLAETIAATDQTGEESVIRLESDANLIKIVTIHKSKGLEYPLVFLPF
ICSFREVGGRNNRYYRYHDAEFNLSIDLTKSDEIKAISDKERLQEDLRLLYVAITRARFA
CWLGMAPIKIGNSKTSQLDKSAMGYLLGWRAGSDLSSCLTQLKGDCEAISISELPEASPD
KYQPPQTKPALDAARVSTARIIDHWWIASYSALQTDQSATGKITDSLAEAENPREDKHGD
EADPTPVLPTPVPAGIHALPRGAEPGVLVHELLEQSAQCGFNSVQSQPELGRQLIANIFK
SPLWDNKRDILEQGLRQWLTLPLLEDTDLSLSGLDSSQYQAEMEFWLGAENVDVSVIDRL
VCRHTFAGQARPGLLANQINGLLKGFIDLLFVHNGQYYVLDYKFNALGNDATAYNRDKLV
NAMLSKRYDLQSVLYLLALHRLLKTRLGDCYDYDSHIGGSVYLFLRGVESPNAGRLVDKP
PRVLIETLDALFGGDSMTGIAA
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgccatcgatccgttgcaattccctctgtccggcacccgtctgatcgag
gccagcgccggcaccggcaagacttataccatcgccgcgctgtatgtgcgtctgatactc
ggccacggccggcaaggcgccgaattattgccgccggacattctggtggtgacctttacc
gatgcggccaccaaggaactgcgcgaacgtatccgcgcccgtctgactcaggcggcggga
tattttcgggaaaaaaccgtcgagaacgacgatttcctgcaaaggctgcgcgccgattat
gcggccgaacactggccggcttgcgcctaccggctggaactggccgccaactggatggac
gaggcagcggtttacaccatacacggctggtgcaaccggacgctgcaacaacatgctttc
gatagcggtagcctgtttcggcaggaagtcgacagcgacgatcaggaattgctgaatcag
gtggtgcgcgattattggcggcggtttttttaccccttgtcttacacggcctgcctggcg
gtctacaagttggccggttcgccggaccaattggccaaaatcctgaaacctcttctattc
gaaaccgaggccttgggtctggagtgcccggaacaggacattgccaaggtatttggtgac
tgggaaaattgggaaatccaacgcggtaacctggaaaatcaggcccgtacacaatggctt
aacgaccaacccacgattgaaaccctgttaaaagatgcctcggaaaaaggctggctcaac
ggcaaccaataccgtaaggccagctttaacgaaaaactcaagcaaatggcggcctgggcg
gccggcgatcaactcgatctcgacgccctggcaaaattcggccaacaaaaactccaggcc
ggtttgaccaaagctcatcaggacaaggcccatccgttcgaacaggccgcgtttcaagcc
atcgatagcttggtcgagcatagcgccgaacaaatcgacatcgccggcctaatcagcctt
catgccatccattggatacgcgcgcgctacgatagcgaaaaacagcgcatcgctcggatg
actttcgacgatatgttgaacaggctggatcaagcattgcaaggcgacaacgccgagcgg
ttggcgaccgccatcgtcaagcaatacccgatggcgttgatcgacgagtttcaggatacc
gatcctgtgcaataccggattttcgcccgtctgtatccggccgatgccgaccgggattcg
gcttgtttcatgatcggcgaccccaagcaggcgatttattcctttcgcggcggcgatatt
tttacctacctgaaagcccatcaggccacgctgggccggcattacaccttgagcaccaac
tatcgctcgaccgaggctctggtatgggccgtcaaccgggtatttgagcaggccgacacc
agccaagccgaaggcgcgttttgcttcaaacacgacgatcacgacccgttgccgttcatt
ccggttaatgcccaaggacgccacgaaacctgggtcatcaagcaacaatcagtccccgca
ctgacgctttggcaactaccttcggaaacgccgataggcatgccggattatcgccggcaa
atggccgatgccaccgccagcgaaatcgtgcgactgctgcatggcgccggccaaggccaa
accggctttcaatccgaacccggcggcatccgcccgttgcaaccggccgacattgcgatc
ttggtgcgcagcggcaccgaagccaaggtcatgcgccaggcgctggccgagcggcaattg
cgtagcgtttatctgtccgaacgcgaatcgatttttgccagcccggaagccgccgatctg
ctgatctggctgaaagccctggccgaaccgcgcgacgaacgcaaggtgcgcgcggcattg
agtagcgccactatcggctggccgtatcaaaccctaaggcaattgaccttggacgaagcc
gcctgggagcaacaactggaacgtttcatcgcttaccagcaacgttggcaacaagacggc
attttgccgaccctgcgccagttgatgagcgattacgccctgcccgcccgtttgcaaacc
gctgccgacggcgaacgccgtttgaccaatttattgcatctggccgaattgctgcagcaa
gccagcagccacctggaaggcgaacaagccttgatccgccatctggccgaaaccatcgcc
gccaccgatcaaaccggcgaggaaagcgtgatacggttggaaagcgacgccaacctgatc
aaaatcgtcacgatacataaatccaagggcttggaatatccgctggtgtttctgccgttc
atttgtagttttcgcgaagtcggcggccgcaataaccgctactaccgttatcacgatgct
gaattcaatctaagcatcgatctgactaaaagcgacgagatcaaggctatcagcgacaag
gaacgcctgcaggaagacttgcgtttgctgtatgtcgccatcacccgcgcccgattcgcc
tgctggctgggaatggcgccgattaaaatcggtaatagcaaaaccagccagctggataaa
agcgcaatgggttatctgttgggttggcgggccggcagcgacctcagcagttgtctgact
caactgaaaggcgattgcgaagccatctccatcagcgaactgcccgaagccagcccggac
aaataccagccgccgcaaaccaaaccggccctggatgctgcccgcgtgtcgaccgctcga
ataatcgaccactggtggatagccagttactcggccctgcaaaccgaccagtccgcgacc
ggcaaaatcaccgacagtttggccgaggcggaaaacccacgcgaggacaaacacggcgac
gaagccgacccgacaccggtgctgcccactccggttcccgccggcattcatgccctgccg
cgcggcgccgaacctggcgtactggtgcatgaattattggagcaatccgcccaatgcggg
tttaacagcgtgcaatcccagcccgaactgggccggcagctgatagccaatatatttaag
tctccgctgtgggataacaaacgcgatattctggaacagggtttgcggcaatggctgacg
ctgccgttactggaagacaccgatcttagcctgtccggcctggatagtagccaatatcag
gccgagatggagttttggttgggggctgagaatgtcgatgtttctgtcatcgataggctg
gtctgccgccatactttcgccggccaggccaggccggggttactggccaatcaaatcaac
ggcctgttgaaaggcttcatcgacctgctgtttgtgcataacggccaatattatgtattg
gattataaattcaacgcccttggcaacgacgccaccgcctacaaccgcgacaagctggtc
aatgcaatgctgagcaaacgttacgatctgcaatcggtgctgtatctattggcgctgcat
cgcttgttgaaaacccggctgggcgattgctacgattacgacagccatatcggcggcagc
gtctatttgtttttacgcggcgttgaaagtcccaatgccggccggctggtggataaaccg
cctagagtgctgatcgagacattggacgccttattcggcggcgattcgatgacaggcatc
gccgcatga
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