Methylomonas sp. LL1: IVG45_10865
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Entry
IVG45_10865 CDS
T07814
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell00540
Lipopolysaccharide biosynthesis
mell01100
Metabolic pathways
mell01250
Biosynthesis of nucleotide sugars
Module
mell_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IVG45_10865 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mell01005
]
IVG45_10865 (rfaD)
Enzymes [BR:
mell01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
IVG45_10865 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mell01005
]
Core region
IVG45_10865 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
ThiF
DUF3929
Motif
Other DBs
NCBI-ProteinID:
QPK65388
UniProt:
A0A7T0JRZ2
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All DBs
Position
complement(2333877..2334818)
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AA seq
313 aa
AA seq
DB search
MIIVTGGAGFIGSNLVLGLNARGYDDILVVDHLTNGVKFKNLVDCRIADYMDRSAFLERL
QQGAFSAESVDAIFHQGACSSTTEWDGRYMMDNNYEYSKTLFHYCQSHKIPFIYASSAAT
YGADPTFKEELAYEGPLNVYGYSKFQFDQYLRRQTKLTAQVVGLRYFNVYGPREAHKGSM
ASVAFHLNNQIKQSDQLKLFEGCDGYGNGEQRRDFIYVGDVVDVNLWFLDNPQVSGIYNC
GTGRSQTFNDVANAVIRYHRRGHIQYIPFPEHLKGCYQSFTEANLDKLRAAGCEHPFKTV
EQGVQHYMEWLNR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaaccggcggtgccggctttatcggcagtaatctggtgttgggcctgaat
gcccgaggttacgatgatattttggtggtcgatcatttgaccaatggagtcaaattcaaa
aatctagtcgattgccggatagcggactacatggacagaagcgcctttctggaacgttta
cagcaaggtgctttttccgccgaatccgtggatgcgatttttcaccaaggcgcctgctca
agtaccaccgagtgggacggccgctacatgatggacaacaattatgagtacagcaaaacg
ctgtttcattattgtcaaagccataaaattccgttcatttatgcctccagcgccgcgact
tacggtgccgatccgacttttaaggaagaattggcttacgaaggtccgctgaatgtctac
ggctattccaaatttcagttcgaccaatatttgcgccgacaaaccaagctgaccgcgcaa
gtggtggggctgcgttatttcaatgtctacggcccgcgcgaagctcataagggcagcatg
gccagcgttgcctttcatttgaacaaccaaatcaaacagtccgaccaattaaaattgttc
gaaggctgtgacggctacggtaacggcgagcaacgccgcgattttatctatgtcggcgat
gtggtcgacgtcaatctgtggtttctggataaccctcaagtttccggtatctacaattgc
ggcaccggccgcagccagaccttcaacgatgttgccaacgcggtgatccgttatcaccgg
cgcggccatatccagtacatcccgttcccggaacatctgaaaggttgttatcaaagcttc
accgaggctaatctggacaaactccgagccgccggttgcgagcatccgttcaaaaccgtc
gagcagggcgtgcagcactatatggagtggttgaaccgatag
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