Methylomonas sp. LL1: IVG45_11620
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Entry
IVG45_11620 CDS
T07814
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IVG45_11620 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mell03019
]
IVG45_11620 (rnc)
03009 Ribosome biogenesis [BR:
mell03009
]
IVG45_11620 (rnc)
03036 Chromosome and associated proteins [BR:
mell03036
]
IVG45_11620 (rnc)
Enzymes [BR:
mell01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IVG45_11620 (rnc)
Messenger RNA biogenesis [BR:
mell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IVG45_11620 (rnc)
Ribosome biogenesis [BR:
mell03009
]
Eukaryotic type
90S particles
RNase
IVG45_11620 (rnc)
Prokaryotic type
rRNA processing factors
IVG45_11620 (rnc)
Chromosome and associated proteins [BR:
mell03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IVG45_11620 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QPK61548
LinkDB
All DBs
Position
complement(2499266..2499946)
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AA seq
226 aa
AA seq
DB search
MIKKSDILARKLGLTFSQPQLFKMALTHRSAGAHNNERLEYLGDSILGFVVAEKLYTLFP
EAGEGILSRLRASLVNQTSLAELARRHNLGDYLILGSGELKSGGYRRDSILSDALEAIMG
ALLLDQGVEVCRHWILGLFADKFAEIRLDSWNKDPKTRLQELMQSRKKELPIYELVGMSG
VDHAQTFEVKCSVVITPQATRGVGVSRKRAEQAAAESMLILLEDQD
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaagtctgacattctcgccagaaagctggggctgacttttagtcagccccaa
ttgtttaaaatggcattaacccaccgcagcgcgggggcgcataataatgaaaggttggaa
tatctgggggattcgatactgggttttgtggttgccgaaaaactgtatacgctgtttcct
gaagccggagaaggaattttaagccgtttgcgcgccagtctggtcaatcagacatccctg
gccgaattggcccggcggcataatctgggcgattatttgattctaggttcgggcgagttg
aaaagtggtggctatcggcgggactcgattctgtcggatgcattggaagcgatcatggga
gccttattgttggaccaaggcgtcgaggtctgccggcattggatattaggcctgtttgcc
gataaattcgccgagatcagattggacagctggaacaaagatcccaagactcgcttgcag
gagttgatgcagtcccgtaaaaaagagctgccgatttacgaattggtgggtatgtctggg
gttgatcatgcgcagaccttcgaagtcaaatgcagcgttgtcatcacgccccaggctacc
cgtggcgtgggcgtttctcgtaaaagagccgagcaggccgcggcggaaagcatgttaatt
cttttagaagatcaggactaa
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