Methylomonas sp. LL1: IVG45_11685
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Entry
IVG45_11685 CDS
T07814
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IVG45_11685 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mell03019
]
IVG45_11685 (groL)
03110 Chaperones and folding catalysts [BR:
mell03110
]
IVG45_11685 (groL)
03029 Mitochondrial biogenesis [BR:
mell03029
]
IVG45_11685 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mell04147
]
IVG45_11685 (groL)
Enzymes [BR:
mell01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IVG45_11685 (groL)
Messenger RNA biogenesis [BR:
mell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IVG45_11685 (groL)
Chaperones and folding catalysts [BR:
mell03110
]
Heat shock proteins
HSP60 / Chaperonin
IVG45_11685 (groL)
Mitochondrial biogenesis [BR:
mell03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IVG45_11685 (groL)
Exosome [BR:
mell04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IVG45_11685 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IVG45_11685 (groL)
Exosomal proteins of breast cancer cells
IVG45_11685 (groL)
Exosomal proteins of colorectal cancer cells
IVG45_11685 (groL)
Exosomal proteins of bladder cancer cells
IVG45_11685 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2209
Motif
Other DBs
NCBI-ProteinID:
QPK61560
LinkDB
All DBs
Position
complement(2516100..2517740)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGGEARALMAQGVNILANAVKVTLGPKGRNAVLDKSFGAPTITKDGVSVAKEI
ELQDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DTAVSAAVAAIEKAATPCVDSHAIAQVGTISANSDESVGAIIAEAMEKVGKEGVITVEEG
TGLNNELDVVEGMQFDRGYLSPYFINKQENMSVELDDPFVLLYDKKISNIREMLPILEGV
AKSGRSLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLEDIAVLTGGVV
ISEEVGLSLEKADISQLGTAKRVQINKENTTIIDGAGDEGQIKGRVAQIRAQADEATSDY
DREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHSTRAAVEEGVVAGGGTALI
RALSALEGLQGNNHDQTVGINILRRAMEEPLRQIVTNAGDEASVVLNEVKKGTGNFGYNA
ATGEYGDMIAMGILDPAKVTRYALQNAASVAGLMITTEVMIADLPADSKAPAMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtaaaatttggcggcgaagcccgcgcattaatggcgcaaggtgtc
aacatcctggctaacgcggtaaaagttaccttgggtcctaaaggccgtaacgccgtactg
gataaaagcttcggcgctccaaccatcaccaaggacggcgtttcagtcgcgaaagaaatc
gaattgcaagacaagttcgaaaatatgggtgcgcaaatggtgaaagaggtcgcttccaag
acttccgatgtggccggcgacggcaccaccaccgcaaccgttttggctcaagctatcgtc
aacgaaggcttgaaatcagtcgccgcgggcatgaacccgatggatctgaaacgtggtatc
gacacagcggttagcgcggcggttgcggcgatcgaaaaggccgcaaccccttgcgtcgac
agccatgccatcgctcaagtcggcactatctccgccaactccgacgaatccgtcggcgcg
atcatcgccgaagcgatggaaaaagtcggtaaagaaggtgttatcaccgttgaagaaggc
actggtttgaacaatgaactggacgtcgtcgaaggtatgcaattcgaccgcggctacctg
tccccatatttcatcaacaaacaagaaaatatgagcgttgaactggacgatccattcgtc
ctgttgtacgacaaaaaaatctccaacatccgcgaaatgttgccgattctggaaggtgtg
gccaaatcaggccgttcactgttgatcattgccgaagacgtcgaaggcgaagccttggcg
actctggttgtcaacaacatgcgcggtatcgttaaagtcgcggcagtcaaagcacctggc
ttcggcgaccgccgtaaagccatgctggaagacatcgcggttctgaccggcggcgtagtg
atctccgaggaagtgggcctgtctctggaaaaagccgacatttctcaattgggcaccgca
aaacgcgtccaaatcaacaaagaaaacaccaccatcatcgacggtgccggcgacgaaggc
caaatcaaaggccgcgtggctcaaatccgtgctcaagccgacgaagcgacttccgattac
gaccgtgaaaaactgcaagaacgtctggctaaattggctggcggcgtagcggtgatcaaa
gtcggtgccgcgaccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgcgctg
cattcaacccgcgcggcggttgaagaaggcgtggtcgccggtggcggtaccgcgctgatt
cgtgcgctgtccgcgctggagggcctgcaaggcaacaaccacgaccaaaccgtcggtatc
aacatcctgcgtcgcgcgatggaagagcccctgcgccaaatcgtcaccaacgccggcgac
gaagcttcggttgtactgaacgaagtcaaaaaaggcacgggtaacttcggttacaacgca
gccaccggtgaatacggcgacatgattgcaatgggtattctggatcccgccaaagtaacc
cgttatgcattgcaaaatgcagcctccgtggccggtctgatgatcactaccgaagtgatg
attgccgatctgccggctgatagcaaggctcctgcaatgcctgacatgggcggcatgggc
ggtatgggcggcatgatgtaa
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