Methylomonas sp. LL1: IVG45_14635
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Entry
IVG45_14635 CDS
T07814
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03030
DNA replication
mell03410
Base excision repair
mell03420
Nucleotide excision repair
mell03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IVG45_14635 (polA)
03410 Base excision repair
IVG45_14635 (polA)
03420 Nucleotide excision repair
IVG45_14635 (polA)
03440 Homologous recombination
IVG45_14635 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mell03032
]
IVG45_14635 (polA)
03400 DNA repair and recombination proteins [BR:
mell03400
]
IVG45_14635 (polA)
Enzymes [BR:
mell01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IVG45_14635 (polA)
DNA replication proteins [BR:
mell03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IVG45_14635 (polA)
DNA repair and recombination proteins [BR:
mell03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IVG45_14635 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IVG45_14635 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QPK62091
UniProt:
A0A7T0JLD0
LinkDB
All DBs
Position
3159519..3162287
Genome browser
AA seq
922 aa
AA seq
DB search
MSDISANKLILVDGSSFLFRAFHAVPPLSNAQGQPTNAIYGVSNMLRKLINDYDTPYVTV
VFDAPGKTFRHDLYDQYKAHRPPMPDDLRVQIQPLHELIKSLGLPLIIEHGVEADDVLGS
LAQNAARQGFDVVISTGDKDMAQLVTERITLENSMTNTRMDIAGVEEKFGVKPEQIIDYL
ALMGDAVDNIPGVPKVGPKTAAKWLQQYGTLDNLIAHAGEIKGKIGDNLREALPQLPLSR
ELTTIKCDVALHYSLEELKRKQPDMAALKQQLGTLGFSSWLKTLNGEQASTLSPTEEQSK
AAASKQETEQRRHQEPIAWLARDYQTLLDQADFDRWLDKLRQAELFAFDTETTSLNYSNA
EIVGVSFAVAAGQAAYLPLAHDYPDAPAQLDRQSVLDALKPLLEDAEKPKLGQNLKYDAH
ILANHGIKLRGIQHDTMLESYVLNSTATKHNMDDLAKHYLGADTIHFEDVAGKGAKQIGF
QEVAVEQAAEYAAEDADITLRLHQTLSEQLRQHPRLWALYNEIEVPLIDVLVRIEENGVL
IDSAMLDQQSLELANRMIGIEQQAHDLAGSAFNLGSPKQIQEILYDRLNLPVLKKTPKGQ
PSTDESVLQELALDYALPRLILEFRGMSKLKSTYTDKLPQQINPKTGRVHTSYHQAVAAT
GRLSSSDPNLQNIPIRSEEGRKIRQAFIAPPGYKIVAADYSQIELRIMAHLSGDAGLLAA
FSQGLDVHSATAAEVFEVEVGQVTHELRRSAKAINFGLIYGMSAFGLAQQLGLSRNQAQA
YIDLYFSRYPGVKQYMDNIREQAKQLGYVETLFGRRLYLPEINARNPAMRQYAERTAINA
PMQGTAADIIKRAMIGCDAWIRNSGADVKMIMQVHDELVFEVAEPQLQDNTETIRDIMSG
AAELRVPLLVEAGCGENWDQAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacatttccgcaaacaaactgattctggtcgacggctcgtcgtttttattccgc
gcctttcatgccgttccgccactaagcaatgcccagggccagcctaccaatgcgatttac
ggcgtgtccaacatgctgcgaaagttgatcaacgattacgacacaccttatgtcacggtg
gtgttcgacgcgccgggcaagacctttcggcatgatttatacgatcagtacaaagcacat
cggccgccgatgccggacgatttgcgggtacaaattcagccgctgcatgaattgatcaaa
tcattgggtttgcctttgatcatcgaacatggcgtcgaagccgacgatgtattgggcagc
ctggcgcaaaatgccgcccggcaaggctttgacgtggtcatttccaccggcgacaaggac
atggcacaactggtgaccgagcggatcacgctggaaaactcgatgaccaatactcggatg
gatattgccggcgtcgaggagaagttcggcgtcaagcccgagcagatcatcgattacctg
gccttgatgggcgatgcggtggacaacatccccggcgtgccgaaagtcggtccgaaaacc
gcagccaaatggctgcaacaatatggcacattggacaatctgatcgcgcatgccggcgag
atcaagggcaagatcggcgataacctgcgtgaagctttgccgcaattgccgttatcgcgg
gaattgaccaccatcaaatgcgacgtggccttgcattacagcctggaggagttgaagcgc
aagcagccggatatggccgccttgaaacagcaactgggcacactgggcttcagcagctgg
ctgaagaccttgaacggcgagcaagcatcaacactttctcccaccgaggaacaaagtaaa
gcggcggcgagcaaacaggaaacggagcaacgtaggcatcaagagccgattgcttggtta
gcccgtgactatcaaacccttctcgaccaggccgatttcgatcgctggctggacaaacta
agacaagccgagctattcgctttcgataccgaaaccaccagcctgaattacagcaatgcc
gaaatcgtcggcgtttcgttcgcggtggcagccggacaagcagcttatctgccgctggct
cacgactatccggatgcaccggcgcaactcgatcggcaaagcgtgctggacgcgttaaag
ccgctgctggaagatgccgaaaaacccaaactgggccagaatctgaaatacgatgcccat
attctggccaatcacggcatcaaactgcgcggcattcaacacgacaccatgctggaatcc
tatgtgttgaacagcacggcgaccaaacacaacatggacgacctggccaagcattatctg
ggcgccgacaccatacatttcgaggacgtggccggcaagggcgccaagcagatcggtttc
caggaagtggctgtcgaacaagccgcggaatatgccgccgaggatgccgatattacgcta
cgcttgcatcagaccctgtcggaacaattgaggcaacatccgcgcctgtgggccttgtat
aacgagatcgaagtgccgctgatcgatgtgttggtacgaatcgaggaaaatggcgtactg
atcgacagcgcgatgctggaccagcaaagtcttgagctggccaatcgcatgataggcata
gagcagcaggcgcatgatctggccggctcggctttcaatctgggttcgcccaaacagata
caggagattttatacgacaggctgaatctgccggtgctgaagaaaacccccaagggccag
ccctccaccgacgaatcggtattacaggagctggcgctggattatgccttgcctaggctg
atcctggaatttcgaggcatgagcaagctgaaatccacctacaccgacaaactgccgcag
caaatcaatcccaaaaccggccgggtgcatacctcctatcatcaggcggtggcggccacc
ggccgcttatcctcgtccgaccctaacctacagaacatcccgatccgtagcgaggaaggc
cgcaagatacgtcaagcctttatcgctccgcccggctacaaaattgttgccgccgactat
tcgcagatcgaactgcgcatcatggctcatttatccggcgatgccggtttattggcggca
ttttcgcagggtctggatgtacacagcgccactgcggcggaagtgttcgaagtggaggtt
ggccaagttactcacgaactgcgccgttcggccaaggccattaatttcggtttgatttac
ggcatgtcggcctttggcttggcccaacaattgggcttgtcgcgtaaccaggcacaagcc
tatattgatctatactttagccgctaccccggcgtgaaacaatatatggataacatccgc
gaacaagccaaacaacttggatacgttgaaacgcttttcggccggcgcctatatttgccg
gagattaatgcccgcaatcccgccatgcgccagtatgccgaacgcaccgcgatcaacgcg
ccgatgcagggcacggcggccgacatcatcaagcgagcgatgataggctgcgacgcctgg
attcggaacagcggcgccgatgtcaagatgatcatgcaagtgcatgacgagttagtgttc
gaggtggcggagccgcaattacaggacaacacggaaacgatacgtgacattatgtccggc
gcagccgagttgcgggtgcctctgctggtggaagccggttgcggcgagaattgggatcaa
gcgcattaa
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