KEGG   Methylomonas sp. LL1: IVG45_17525
Entry
IVG45_17525       CDS       T07814                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
mell  Methylomonas sp. LL1
Pathway
mell03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mell00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IVG45_17525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mell03019]
    IVG45_17525
Enzymes [BR:mell01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     IVG45_17525
Messenger RNA biogenesis [BR:mell03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     IVG45_17525
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Nup54_57_C
Other DBs
NCBI-ProteinID: QPK62631
UniProt: A0A7T0JMD4
LinkDB
Position
3775554..3776879
AA seq 441 aa
MKKAHLTETRFSNLELSDSIIKGLKEAGFIQCTPIQDKSLPLALRDKDVAGQAQTGTGKT
ASFLLATFQRLINDESEKIKNPRALILAPTRELAIQIHKDALVLGKYLNLKLALIYGGTD
YQKQLDKLKTNVDIIIGTPGRIIDFYKQGAFTLDNIQVTVMDEADRMFDLGFIKDIRFLL
RRMPPPEKRLNLLFSATLSYKVTELAYEHMNNPVLIRIETEEVTSKAINQIAYCPANDQK
IPLLLGLLKTHQPVRSIVFVNTKRCAEQLDDYLQANGHKTAMLSGDVPQEKRQRLLADFQ
ENRVTLLIATDVAARGLHIPDVSHVFNYDLPQDVEDYVHRIGRTARFGASGEAISFICEE
YAYSMPDIEDYIGEKVPVESITPELLVEDVIKPERREPRERVVPHGKRPPRSDHKPREFK
GPRRDTSPASAPENPPLPETP
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgaaaaaagcacatttgacggaaacacgttttagcaatctggagctttccgactccatt
atcaaaggcctgaaggaagcgggattcatccaatgcacgcccattcaggacaaatccttg
ccgctggcgctacgcgacaaagacgtggccggtcaggcccaaaccggcaccggcaaaacg
gccagctttttgttggccacgtttcaacgcctgatcaacgacgaaagcgaaaaaatcaag
aatccgcgggcattgattttggcgccgaccagggaactggcaattcagattcataaagac
gcgctggttttgggcaaatatctgaacctgaagttagcgttgatctacggcggcaccgac
tatcagaaacagctcgataagctcaaaaccaatgtcgacatcatcatcggcacgcctgga
cgcatcatcgatttttacaagcaaggcgccttcacgctggataatattcaggtcacggta
atggacgaagccgaccgcatgttcgatttgggctttatcaaggatatacgcttcttgctg
cgccggatgccgccaccggaaaaacgcctgaatttgctgttttcggccaccttgtcctac
aaggtcaccgaactagcttatgagcatatgaacaatccggtcttgattcggatagaaacc
gaagaagtgacctccaaggccatcaatcaaatcgcctattgtccggccaacgaccaaaaa
attccgttgttgctcggcttgctgaagacccatcaacccgtgcgcagcatcgtcttcgtc
aataccaagcgttgcgcggaacaactggacgattatctgcaagccaacggccataaaacc
gcaatgctcagcggcgacgtgccgcaggaaaaacgccaacgcttgttggccgatttccag
gaaaaccgggtgacgctgctgattgccaccgacgtggcggcgcgtggcctgcatattccg
gatgtctcgcatgtgttcaattacgatttgccgcaggacgtggaagattacgtgcatcgc
atcggccgtaccgcccgcttcggcgccagcggcgaggccatcagctttatttgcgaggaa
tatgcctattcgatgccagacatcgaagactatatcggtgagaaagtgccggtggaatcg
attaccccggaactactggtcgaggatgtgatcaagccggaacgccgcgaaccgcgtgaa
agagtggtaccgcacggcaaacgtccgccgcgctcggatcataaaccccgtgagttcaaa
ggccctcggcgggacacaagcccggcatcagcccccgaaaatcctccgttgccggaaact
ccgtaa

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