Methylomonas sp. LL1: IVG45_17525
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Entry
IVG45_17525 CDS
T07814
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IVG45_17525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mell03019
]
IVG45_17525
Enzymes [BR:
mell01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IVG45_17525
Messenger RNA biogenesis [BR:
mell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IVG45_17525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Nup54_57_C
Motif
Other DBs
NCBI-ProteinID:
QPK62631
UniProt:
A0A7T0JMD4
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All DBs
Position
3775554..3776879
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AA seq
441 aa
AA seq
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MKKAHLTETRFSNLELSDSIIKGLKEAGFIQCTPIQDKSLPLALRDKDVAGQAQTGTGKT
ASFLLATFQRLINDESEKIKNPRALILAPTRELAIQIHKDALVLGKYLNLKLALIYGGTD
YQKQLDKLKTNVDIIIGTPGRIIDFYKQGAFTLDNIQVTVMDEADRMFDLGFIKDIRFLL
RRMPPPEKRLNLLFSATLSYKVTELAYEHMNNPVLIRIETEEVTSKAINQIAYCPANDQK
IPLLLGLLKTHQPVRSIVFVNTKRCAEQLDDYLQANGHKTAMLSGDVPQEKRQRLLADFQ
ENRVTLLIATDVAARGLHIPDVSHVFNYDLPQDVEDYVHRIGRTARFGASGEAISFICEE
YAYSMPDIEDYIGEKVPVESITPELLVEDVIKPERREPRERVVPHGKRPPRSDHKPREFK
GPRRDTSPASAPENPPLPETP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcacatttgacggaaacacgttttagcaatctggagctttccgactccatt
atcaaaggcctgaaggaagcgggattcatccaatgcacgcccattcaggacaaatccttg
ccgctggcgctacgcgacaaagacgtggccggtcaggcccaaaccggcaccggcaaaacg
gccagctttttgttggccacgtttcaacgcctgatcaacgacgaaagcgaaaaaatcaag
aatccgcgggcattgattttggcgccgaccagggaactggcaattcagattcataaagac
gcgctggttttgggcaaatatctgaacctgaagttagcgttgatctacggcggcaccgac
tatcagaaacagctcgataagctcaaaaccaatgtcgacatcatcatcggcacgcctgga
cgcatcatcgatttttacaagcaaggcgccttcacgctggataatattcaggtcacggta
atggacgaagccgaccgcatgttcgatttgggctttatcaaggatatacgcttcttgctg
cgccggatgccgccaccggaaaaacgcctgaatttgctgttttcggccaccttgtcctac
aaggtcaccgaactagcttatgagcatatgaacaatccggtcttgattcggatagaaacc
gaagaagtgacctccaaggccatcaatcaaatcgcctattgtccggccaacgaccaaaaa
attccgttgttgctcggcttgctgaagacccatcaacccgtgcgcagcatcgtcttcgtc
aataccaagcgttgcgcggaacaactggacgattatctgcaagccaacggccataaaacc
gcaatgctcagcggcgacgtgccgcaggaaaaacgccaacgcttgttggccgatttccag
gaaaaccgggtgacgctgctgattgccaccgacgtggcggcgcgtggcctgcatattccg
gatgtctcgcatgtgttcaattacgatttgccgcaggacgtggaagattacgtgcatcgc
atcggccgtaccgcccgcttcggcgccagcggcgaggccatcagctttatttgcgaggaa
tatgcctattcgatgccagacatcgaagactatatcggtgagaaagtgccggtggaatcg
attaccccggaactactggtcgaggatgtgatcaagccggaacgccgcgaaccgcgtgaa
agagtggtaccgcacggcaaacgtccgccgcgctcggatcataaaccccgtgagttcaaa
ggccctcggcgggacacaagcccggcatcagcccccgaaaatcctccgttgccggaaact
ccgtaa
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