Methylomonas sp. LL1: IVG45_19540
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Entry
IVG45_19540 CDS
T07814
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mell
Methylomonas sp. LL1
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mell03032
]
IVG45_19540
03036 Chromosome and associated proteins [BR:
mell03036
]
IVG45_19540
03400 DNA repair and recombination proteins [BR:
mell03400
]
IVG45_19540
DNA replication proteins [BR:
mell03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IVG45_19540
Chromosome and associated proteins [BR:
mell03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IVG45_19540
DNA repair and recombination proteins [BR:
mell03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IVG45_19540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Lmo2446-like_N
HU-DNA_bdg
Phage_holin_2_4
Motif
Other DBs
NCBI-ProteinID:
QPK62985
UniProt:
A0A7T0NY65
LinkDB
All DBs
Position
4178790..4179062
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AA seq
90 aa
AA seq
DB search
MNKSELIDAIASASQLTKADAGRALDGFIKSVEEALKKGDSVALVGFGTFEVKERAERKG
RNPQTGEEITIKAAKIPSFKAGKSLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggaactgattgatgctattgcttcggcatctcaattgacaaaagccgac
gccggccgtgctttagatggttttatcaaatctgttgaagaagcactgaaaaaaggcgat
tcagttgccttggttggttttggcacctttgaagtgaaagaaagagccgaacgtaaaggc
cgcaatccgcaaaccggtgaagagattactatcaaggccgcaaaaattccttcatttaaa
gctggtaaatctttaaaagatgctgtaaactag
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